RNA id: TU92299


Basic Information

Item Value
RNA id TU92299
length 224
lncRNA type intronic
GC content 0.50
exon number 1
gene id G73918
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37826479 ~ 37826702 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaacacctatggtTTGAACGTACTGGTGATTTGGGAACACGAGTGGACGGCCCTGAAGCAGCAGGATGCGGGGGTACAACGGTTTATGGAAACCTTGGACTTTCCTGAACGTCTAGAGCCCCGGGATGCGTTATTTGGGGGTCGTACCAACgccatctgtttacattatgaggtaaaggagggggagagagtagattactatgatttcacCAGTCTGTACCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92297 lncRNA downstream 42904 37779333 ~ 37783575 (-) False G73916
TU92291 lncRNA downstream 122431 37703846 ~ 37704048 (-) True G73911
TU92288 lncRNA downstream 142937 37683239 ~ 37683542 (-) True G73908
TU92243 lncRNA downstream 244317 37581766 ~ 37582162 (-) True G73866
TU92234 lncRNA downstream 252339 37573738 ~ 37574140 (-) True G73857
TU92314 lncRNA upstream 16468 37843170 ~ 37844343 (-) False AMCG00014865
TU92368 lncRNA upstream 236645 38063347 ~ 38071617 (-) True G73980
TU92433 lncRNA upstream 351272 38177974 ~ 38180598 (-) True G74030
TU92434 lncRNA upstream 353345 38180047 ~ 38180598 (-) False G74030
TU92461 lncRNA upstream 454735 38281437 ~ 38283517 (-) True G74052
AMCG00014860 mRNA downstream 210117 37602472 ~ 37616362 (-) True AMCG00014860
AMCG00014861 mRNA downstream 268270 37554889 ~ 37558209 (-) True AMCG00014861
AMCG00014859 mRNA downstream 405312 37417533 ~ 37421167 (-) True AMCG00014859
AMCG00014857 mRNA downstream 466770 37323742 ~ 37359709 (-) True AMCG00014857
AMCG00014858 mRNA downstream 516662 37302224 ~ 37309817 (-) True AMCG00014858
AMCG00014866 mRNA upstream 44704 37871406 ~ 37887963 (-) True AMCG00014866
AMCG00014871 mRNA upstream 118445 37945147 ~ 37954312 (-) True AMCG00014871
AMCG00014875 mRNA upstream 210661 38037363 ~ 38040051 (-) True AMCG00014875
AMCG00014874 mRNA upstream 220784 38047486 ~ 38052112 (-) True AMCG00014874
AMCG00014878 mRNA upstream 299341 38126043 ~ 38128745 (-) True AMCG00014878
TU92296 other downstream 42904 37779333 ~ 37783575 (-) True G73916
TU92209 other downstream 501172 37325020 ~ 37325307 (-) True G73833
TU92007 other downstream 1432986 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 1572292 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 1644128 36101358 ~ 36182351 (-) True G73604
TU92499 other upstream 516620 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 585458 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 605561 38432263 ~ 38432875 (-) True G74115
TU92559 other upstream 663621 38490323 ~ 38490940 (-) False AMCG00014891
TU92596 other upstream 770666 38597368 ~ 38644538 (-) False G74160

Expression Profile