RNA id: TU92674



Basic Information


Item Value
RNA id TU92674
length 313
lncRNA type intronic
GC content 0.35
exon number 1
gene id G74223
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38787961 ~ 38788273 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttatataacatattcatatactaacTGTTGGGGATAATTGAGTTTGGTgggcatactgattatttaacctactgtaaccatgtaactcattgtattgtattcttattgtaggattagcctttaacagaagttgcagagttaacattgttaaaatatctcACCGGAGGAAATGTTGCCATGGCAAGgggggctgaaatttgtcattgttgcagaaataatatcataaataacatactcgtgcataactatttctgtgaagGTCTAGACAATTGAACTCATGGCCTTCTTGACTCtatcttggaaatgtcaaacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92672 lncRNA downstream 11206 38775704 ~ 38776755 (-) True G74221
TU92657 lncRNA downstream 36984 38722604 ~ 38750977 (-) False G74206
TU92655 lncRNA downstream 36984 38732718 ~ 38750977 (-) True G74206
TU92615 lncRNA downstream 125506 38662138 ~ 38662455 (-) True G74174
TU92608 lncRNA downstream 138671 38648922 ~ 38649290 (-) True G74167
TU92675 lncRNA upstream 14643 38802916 ~ 38803885 (-) True G74224
TU92683 lncRNA upstream 48622 38836895 ~ 38837139 (-) True G74232
TU92693 lncRNA upstream 79288 38867561 ~ 38867926 (-) True G74239
TU92735 lncRNA upstream 214349 39002622 ~ 39042048 (-) True G74277
TU92771 lncRNA upstream 394093 39182366 ~ 39182634 (-) True G74307
AMCG00014895 mRNA downstream 99900 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 158761 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 295007 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 364120 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014888 mRNA downstream 385167 38363902 ~ 38402794 (-) True AMCG00014888
AMCG00014902 mRNA upstream 350550 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 416774 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 474868 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 493881 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 590171 39378444 ~ 39379116 (-) False AMCG00014906
TU92596 other downstream 143423 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 297021 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 355086 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 374730 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 437670 38343322 ~ 38350291 (-) False G74087
TU92703 other upstream 109822 38898095 ~ 38920353 (-) True G74247
TU92854 other upstream 469789 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 849626 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 1113197 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 1146620 39934893 ~ 40012081 (-) True G74593

Expression Profile