RNA id: TU92677



Basic Information


Item Value
RNA id TU92677
length 706
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G74226
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38809928 ~ 38810633 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTCCATTCAATGAAAATTATGCAGTTAGGcaaataatagcaaaatactCTGATGTGTTTGCCAGGCATCAGCATGATTGTGGTAATGTGGGTCAGGAGGAAGATATCAATGGTCCTCCTcacaaatttcaaaaacaatatgggATACCCACTGAAAGTCACAAATCTGTTGCAACTGTTATTAGTTCTCTGTTACAGCAAGGAGTCATAAGACATTGTACTTCTACAACAAACTCTCCAATTTGgcctgtgcggaagccagacaGATCCTGGAGACTGACTGTGGACTACAGGCAACTCAACGCTATGACACCTACCTGTGCACCGATTGGAAGAGACACTGCCACTCTACTGTCCCGTGTCCCAATTGACAGTAAGGTCTTCACATTGCTGGACATTTCCAATGGTTTCTGGAGCGTTCCACTTGCTCAAAATTGCCAATACAAATTTGCTTTCACTTTTAACAATCAGCAATACATATGGACTCGCTTACCGCAAGGTTTGCATAATTCTCCAAACCATTTTTCACAAGCGGATGGCTGAGGCTATAAAAAGTTTTTCCAGACCTGAGTGCCTTGTCCAATACGTCGATGATCTACTGCTTGCTACAACTACAGAAGAAGAACATCTTCAGCTCTTTGATGAACTCTTAAGTCTCCTTTCACAAGGAGGTTTGAAAATCAACCCAAAGAAAGTGCAATTGTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92676 lncRNA upstream 2006 38807670 ~ 38807922 (+) True G74225
TU92673 lncRNA upstream 21655 38787961 ~ 38788273 (+) True G74222
TU92670 lncRNA upstream 44881 38764823 ~ 38765047 (+) True G74219
TU92644 lncRNA upstream 58562 38732718 ~ 38751366 (+) True G74202
TU92637 lncRNA upstream 95813 38713665 ~ 38714115 (+) True G74195
TU92687 lncRNA downstream 52780 38863413 ~ 38865708 (+) True G74234
TU92701 lncRNA downstream 109172 38919805 ~ 38941759 (+) True G74246
TU92770 lncRNA downstream 371646 39182279 ~ 39182634 (+) True G74306
TU92795 lncRNA downstream 465607 39276240 ~ 39276838 (+) True G74329
TU92796 lncRNA downstream 468603 39279236 ~ 39279968 (+) True G74330
AMCG00014896 mRNA upstream 25756 38783395 ~ 38784172 (+) True AMCG00014896
AMCG00014893 mRNA upstream 162986 38643054 ~ 38646942 (+) True AMCG00014893
AMCG00014892 mRNA upstream 167411 38629121 ~ 38642517 (+) True AMCG00014892
AMCG00014890 mRNA upstream 237023 38553972 ~ 38572905 (+) True AMCG00014890
AMCG00014887 mRNA upstream 343701 38458369 ~ 38466227 (+) True AMCG00014887
AMCG00014898 mRNA downstream 151320 38961953 ~ 38968022 (+) True AMCG00014898
AMCG00014899 mRNA downstream 417294 39227927 ~ 39233005 (+) True AMCG00014899
AMCG00014900 mRNA downstream 426991 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014904 mRNA downstream 570468 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014908 mRNA downstream 701139 39511772 ~ 39529811 (+) True AMCG00014908
TU92541 other upstream 377067 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 1291522 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 3415279 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 3849481 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 4029338 34780122 ~ 34780590 (+) True G73329
TU92678 other downstream 60 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 525635 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 796254 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 1054449 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 1054987 39865620 ~ 39872003 (+) False AMCG00014923

Expression Profile