RNA id: TU92683


Basic Information

Item Value
RNA id TU92683
length 245
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G74232
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38836895 ~ 38837139 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctctgaatagcctgtgctgccgagattgtatctgctgagccacctattttagtatcatctgcaaatgtgacaagtttgttaactatcccagagtccagatcattaatatagattagaaaaagcacaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcgactcctctaatca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92675 lncRNA downstream 33010 38802916 ~ 38803885 (-) True G74224
TU92674 lncRNA downstream 48622 38787961 ~ 38788273 (-) True G74223
TU92672 lncRNA downstream 60140 38775704 ~ 38776755 (-) True G74221
TU92657 lncRNA downstream 85918 38722604 ~ 38750977 (-) False G74206
TU92655 lncRNA downstream 85918 38732718 ~ 38750977 (-) True G74206
TU92693 lncRNA upstream 30422 38867561 ~ 38867926 (-) True G74239
TU92735 lncRNA upstream 165483 39002622 ~ 39042048 (-) True G74277
TU92771 lncRNA upstream 345227 39182366 ~ 39182634 (-) True G74307
TU92846 lncRNA upstream 395165 39232304 ~ 39238764 (-) True G74368
TU92855 lncRNA upstream 421391 39258530 ~ 39260360 (-) False G74375
AMCG00014897 mRNA downstream 543 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 148834 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 207695 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 343941 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 413054 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014902 mRNA upstream 301684 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 367908 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 426002 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 445015 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 541305 39378444 ~ 39379116 (-) False AMCG00014906
TU92596 other downstream 192357 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 345955 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 404020 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 423664 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 486604 38343322 ~ 38350291 (-) False G74087
TU92703 other upstream 60956 38898095 ~ 38920353 (-) True G74247
TU92854 other upstream 420923 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 800760 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 1064331 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 1097754 39934893 ~ 40012081 (-) True G74593

Expression Profile