RNA id: TU92687



Basic Information


Item Value
RNA id TU92687
length 563
lncRNA type inter_gene
GC content 0.42
exon number 4
gene id G74234
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38863413 ~ 38865708 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGTGCTGGTTCCATACATTTCCACAGGAGAGATGGCTGCcctgtgtattattattgtgttagttgtcctgaaaaataaatgGAAGAAGAAAACAGACCAGGCAGGTGCTGAGGGTGACCCCTACGCAGCGCTGCAGATCTCTAATGTGGCCTCGGACTATGGTGTAATCCAGGGAGGCTGCCGAGTGAAGGGGGAGGACAATGACTCTGAATATGAAACCACAGGAAAGAAGCCGGTGAATTCAAATTCACAGCCGTCTGACTGAAGCAGATGTGCGTGTGTTTGGAAACTGTTTCCCAGCAATGTGTCTTGTGCTCTCATGATTTCAAGTATGTTTCTTAAGAGTGAAAGTAATCCCCCCTCAGTGGTATTCATTTGGGTTCAGAATCTCAGCATCTCAGAATAAATGTGcagcacttttattttgaatgtgttctATCTTATTACCCCACTatgcacatattatatattgcatgaattgaaataaattgtattaattagcCCCAATTTTCGCCTGGTTTTACTGTTGGCATATTTCTActtataactctgtaactacaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92677 lncRNA upstream 52780 38809928 ~ 38810633 (+) True G74226
TU92676 lncRNA upstream 55491 38807670 ~ 38807922 (+) True G74225
TU92673 lncRNA upstream 75140 38787961 ~ 38788273 (+) True G74222
TU92670 lncRNA upstream 98366 38764823 ~ 38765047 (+) True G74219
TU92644 lncRNA upstream 112047 38732718 ~ 38751366 (+) True G74202
TU92701 lncRNA downstream 54097 38919805 ~ 38941759 (+) True G74246
TU92770 lncRNA downstream 316571 39182279 ~ 39182634 (+) True G74306
TU92795 lncRNA downstream 410532 39276240 ~ 39276838 (+) True G74329
TU92796 lncRNA downstream 413528 39279236 ~ 39279968 (+) True G74330
TU92799 lncRNA downstream 419586 39285294 ~ 39285804 (+) True G74333
AMCG00014896 mRNA upstream 79241 38783395 ~ 38784172 (+) True AMCG00014896
AMCG00014893 mRNA upstream 216471 38643054 ~ 38646942 (+) True AMCG00014893
AMCG00014892 mRNA upstream 220896 38629121 ~ 38642517 (+) True AMCG00014892
AMCG00014890 mRNA upstream 290508 38553972 ~ 38572905 (+) True AMCG00014890
AMCG00014887 mRNA upstream 397186 38458369 ~ 38466227 (+) True AMCG00014887
AMCG00014898 mRNA downstream 96245 38961953 ~ 38968022 (+) True AMCG00014898
AMCG00014899 mRNA downstream 362219 39227927 ~ 39233005 (+) True AMCG00014899
AMCG00014900 mRNA downstream 371916 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014904 mRNA downstream 515393 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014908 mRNA downstream 646064 39511772 ~ 39529811 (+) True AMCG00014908
TU92678 other upstream 52285 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 430552 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 1345007 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 3468764 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 3902966 34942011 ~ 34960447 (+) True G73343
TU92814 other downstream 470560 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 741179 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 999374 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 999912 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 1007432 39873140 ~ 39875428 (+) True AMCG00014923

Expression Profile