RNA id: TU92693



Basic Information


Item Value
RNA id TU92693
length 366
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G74239
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38867561 ~ 38867926 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGCCTCTTCTTTTTCGAGTTTAGTCGTAGTGTCGTTCAACAACTGAGTTCGACGCGACTCTACTTCATCAAAGTCCAAACCGCCTAGGCTTTCAATGTATTCGGGGATCTCAATCCCTGATACTTTCACAATCAATGCTTCACATGGGGACATTTGGGTCGTCATTGTTTTTGGTTATTCAGTAACAACCCAAccaaagagtaagagattaatCACTTAATGACTCTAATGCCAAAACTTAGAATATCAACAATTTACCACAAGTAAACCTAAACCAGACAAAAACCTTTTGTGACTTTGGAGACCATACAGAATACCACGTGTGCAAGTCTAGAGCACCCTCTAGAGTACAAACAGTGTATCGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92683 lncRNA downstream 30422 38836895 ~ 38837139 (-) True G74232
TU92675 lncRNA downstream 63676 38802916 ~ 38803885 (-) True G74224
TU92674 lncRNA downstream 79288 38787961 ~ 38788273 (-) True G74223
TU92672 lncRNA downstream 90806 38775704 ~ 38776755 (-) True G74221
TU92657 lncRNA downstream 116584 38722604 ~ 38750977 (-) False G74206
TU92735 lncRNA upstream 134696 39002622 ~ 39042048 (-) True G74277
TU92771 lncRNA upstream 314440 39182366 ~ 39182634 (-) True G74307
TU92846 lncRNA upstream 364378 39232304 ~ 39238764 (-) True G74368
TU92855 lncRNA upstream 390604 39258530 ~ 39260360 (-) False G74375
TU92839 lncRNA upstream 426025 39293951 ~ 39295579 (-) False G74367
AMCG00014897 mRNA downstream 31209 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 179500 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 238361 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 374607 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 443720 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014902 mRNA upstream 270897 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 337121 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 395215 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 414228 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 510518 39378444 ~ 39379116 (-) False AMCG00014906
TU92596 other downstream 223023 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 376621 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 434686 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 454330 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 517270 38343322 ~ 38350291 (-) False G74087
TU92703 other upstream 30169 38898095 ~ 38920353 (-) True G74247
TU92854 other upstream 390136 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 769973 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 1033544 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 1066967 39934893 ~ 40012081 (-) True G74593

Expression Profile