RNA id: TU92770



Basic Information


Item Value
RNA id TU92770
length 356
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G74306
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39182279 ~ 39182634 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cttacaaagaagattttgtgcacaaccttggagccttcaaaccagtggaaaatctgtttggaaaagactctaccttctcgaaaccccaacttccaggtgcatcgactgagtggaagttttggacaaagccgaaccggactgcctttgttccaaccacacggacctcgtgccgtgtgctgttatctgagcccgaagacagagaggcctctctgcgacgaagttcagataagtttaacagtttggagtttgtgattcatgacatttgagaaatcaattagaaatgttaatctgtgattcataactctagaatgtgtaatatcatttagttttcttaaatataaatgtgtgttgcattg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92701 lncRNA upstream 240520 38919805 ~ 38941759 (+) True G74246
TU92687 lncRNA upstream 316571 38863413 ~ 38865708 (+) True G74234
TU92677 lncRNA upstream 371646 38809928 ~ 38810633 (+) True G74226
TU92676 lncRNA upstream 374357 38807670 ~ 38807922 (+) True G74225
TU92673 lncRNA upstream 394006 38787961 ~ 38788273 (+) True G74222
TU92795 lncRNA downstream 93606 39276240 ~ 39276838 (+) True G74329
TU92796 lncRNA downstream 96602 39279236 ~ 39279968 (+) True G74330
TU92799 lncRNA downstream 102660 39285294 ~ 39285804 (+) True G74333
TU92804 lncRNA downstream 122946 39305580 ~ 39305974 (+) True G74338
TU92830 lncRNA downstream 294182 39476816 ~ 39481707 (+) True G74363
AMCG00014898 mRNA upstream 214257 38961953 ~ 38968022 (+) True AMCG00014898
AMCG00014896 mRNA upstream 398107 38783395 ~ 38784172 (+) True AMCG00014896
AMCG00014893 mRNA upstream 535337 38643054 ~ 38646942 (+) True AMCG00014893
AMCG00014892 mRNA upstream 539762 38629121 ~ 38642517 (+) True AMCG00014892
AMCG00014890 mRNA upstream 609374 38553972 ~ 38572905 (+) True AMCG00014890
AMCG00014899 mRNA downstream 45293 39227927 ~ 39233005 (+) True AMCG00014899
AMCG00014900 mRNA downstream 54990 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014904 mRNA downstream 198467 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014908 mRNA downstream 329138 39511772 ~ 39529811 (+) True AMCG00014908
AMCG00014907 mRNA downstream 383099 39565733 ~ 39575588 (+) True AMCG00014907
TU92678 other upstream 371151 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 749418 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 1663873 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 3787630 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 4221832 34942011 ~ 34960447 (+) True G73343
TU92814 other downstream 153634 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 424253 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 682448 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 682986 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 690506 39873140 ~ 39875428 (+) True AMCG00014923

Expression Profile