RNA id: TU92771


Basic Information

Item Value
RNA id TU92771
length 269
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G74307
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39182366 ~ 39182634 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caatgcaacacacatttatatttaagaaaactaaatgatattacacattctagagttatgaatcacagattaacatttctaattgatttctcaaatgtcatgaatcacaaactccaaactgttaaacttatctgaacttcgtcgcagagaggcctctctgtcttcgggctcagataacagcacacggcacgaggtccgtgtggttggaacaaaggcagtccggttcggctttgtccaaaacttccactcagtcgatgcacctggaagtt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92735 lncRNA downstream 140318 39002622 ~ 39042048 (-) True G74277
TU92693 lncRNA downstream 314440 38867561 ~ 38867926 (-) True G74239
TU92683 lncRNA downstream 345227 38836895 ~ 38837139 (-) True G74232
TU92675 lncRNA downstream 378481 38802916 ~ 38803885 (-) True G74224
TU92674 lncRNA downstream 394093 38787961 ~ 38788273 (-) True G74223
TU92846 lncRNA upstream 49670 39232304 ~ 39238764 (-) True G74368
TU92855 lncRNA upstream 75896 39258530 ~ 39260360 (-) False G74375
TU92839 lncRNA upstream 111317 39293951 ~ 39295579 (-) False G74367
TU92844 lncRNA upstream 111317 39293951 ~ 39299385 (-) False G74367
TU92845 lncRNA upstream 111317 39293951 ~ 39299385 (-) True G74367
AMCG00014902 mRNA downstream 5705 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014897 mRNA downstream 346014 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 494305 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 553166 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 689412 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014901 mRNA upstream 22413 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 80507 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 99520 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 195810 39378444 ~ 39379116 (-) False AMCG00014906
AMCG00014910 mRNA upstream 348692 39531326 ~ 39536843 (-) True AMCG00014910
TU92703 other downstream 262013 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 537828 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 691426 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 749491 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 769135 38412160 ~ 38413231 (-) True G74107
TU92854 other upstream 75428 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 455265 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 718836 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 752259 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 762096 39944730 ~ 39951070 (-) True G74591

Expression Profile