RNA id: TU92866


Basic Information

Item Value
RNA id TU92866
length 220
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G74386
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39305708 ~ 39305970 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaatgacacttagaacaggggatgtgccaactgactggaagatggcaaatgtcataccaatccacaagaaaggggacaaagctgagccaggaaattacagaccaatcagtctcacctgcatcacctgtaaaatgaaaaccatattcttggagatagtcaacatgggtttagacgaggcagatcatgtcttactcatttattagaattttttgaacatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92865 lncRNA downstream 2484 39303021 ~ 39303224 (-) True G74385
TU92864 lncRNA downstream 3500 39301924 ~ 39302208 (-) True G74384
TU92844 lncRNA downstream 6323 39293951 ~ 39299385 (-) False G74367
TU92845 lncRNA downstream 6323 39293951 ~ 39299385 (-) True G74367
TU92843 lncRNA downstream 6323 39296992 ~ 39299385 (-) False G74367
TU92867 lncRNA upstream 8596 39314566 ~ 39315128 (-) True G74387
TU92875 lncRNA upstream 32360 39338330 ~ 39401229 (-) True G74395
TU92884 lncRNA upstream 72205 39378175 ~ 39379153 (-) True AMCG00014906
TU92894 lncRNA upstream 147683 39453653 ~ 39453963 (-) True G74413
TU92896 lncRNA upstream 157109 39463079 ~ 39477104 (-) True G74414
AMCG00014905 mRNA downstream 20361 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014903 mRNA downstream 35464 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014901 mRNA downstream 88610 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014902 mRNA downstream 129047 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014897 mRNA downstream 469356 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014906 mRNA upstream 72474 39378444 ~ 39379116 (-) False AMCG00014906
AMCG00014910 mRNA upstream 225356 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014914 mRNA upstream 284588 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014915 mRNA upstream 286644 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014917 mRNA upstream 334441 39640411 ~ 39641256 (-) True AMCG00014917
TU92854 other downstream 45348 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 385355 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 661170 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 814768 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 872833 38432263 ~ 38432875 (-) True G74115
TU92969 other upstream 331929 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 595500 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 628923 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 638760 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 678724 39984694 ~ 40012081 (-) False G74593

Expression Profile