RNA id: TU92896



Basic Information


Item Value
RNA id TU92896
length 291
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G74414
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39463079 ~ 39477104 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCAGCTGAGCAAAACTTCTCATCTTAATAAACCCTGCAACGGCGGTCATAGAGCAGCTCCAAACCAGCAGCATTACAATGTGAATCGGACAGAAACAGTAAATACTCAGTGTAGTTCTGCTCTTCTATTGCAGGTGAGAGACTGTAGCCGCCTACCTGATCCACATCAGTATGATGGCCGTTGTGCTCCTGCACGGCACACAGGCTGCAGATCCAGGTCTGGTCGGTCTGACAGAACACCTCCAGAGCTCTGCGGTGCTGCTGGCACAGTCTGGTCTCCAGGTCTCCAGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92894 lncRNA downstream 9116 39453653 ~ 39453963 (-) True G74413
TU92875 lncRNA downstream 61850 39338330 ~ 39401229 (-) True G74395
TU92884 lncRNA downstream 83926 39378175 ~ 39379153 (-) True AMCG00014906
TU92867 lncRNA downstream 147951 39314566 ~ 39315128 (-) True G74387
TU92866 lncRNA downstream 157109 39305708 ~ 39305970 (-) True G74386
TU92912 lncRNA upstream 21599 39498703 ~ 39499677 (-) True G74427
TU92932 lncRNA upstream 93574 39570678 ~ 39571406 (-) True G74446
TU92952 lncRNA upstream 113392 39590496 ~ 39591405 (-) False AMCG00014914
TU92961 lncRNA upstream 146250 39623354 ~ 39624793 (-) True G74469
TU93009 lncRNA upstream 222459 39699563 ~ 39702594 (-) True G74501
AMCG00014906 mRNA downstream 83963 39378444 ~ 39379116 (-) False AMCG00014906
AMCG00014905 mRNA downstream 177732 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014903 mRNA downstream 192835 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014901 mRNA downstream 245981 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014902 mRNA downstream 286418 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014910 mRNA upstream 54222 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014914 mRNA upstream 113454 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014915 mRNA upstream 115510 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014917 mRNA upstream 163307 39640411 ~ 39641256 (-) True AMCG00014917
AMCG00014916 mRNA upstream 171700 39648804 ~ 39657562 (-) True AMCG00014916
TU92854 other downstream 202719 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 542726 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 818541 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 972139 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 1030204 38432263 ~ 38432875 (-) True G74115
TU92969 other upstream 160795 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 424366 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 457789 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 467626 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 507590 39984694 ~ 40012081 (-) False G74593

Expression Profile