RNA id: TU93009



Basic Information


Item Value
RNA id TU93009
length 217
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G74501
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39699563 ~ 39702594 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAACACGTCAGCAGAGCCTGCAGGGCGTCTGGGCGTCTCTATTCCCCAGGTGAGAGATCTGTCCACCTGCAGCCGAGCAGGAAGTGCTGCCTCTCAGAGCAGAGAGACTCTTAAGAGGAGAGATGGCGTCTGTGAGCTCAGCCCCGGAGATGGgggaGGTAGGCCAGGCTGCTTCCCATGAGGCACAGCGACTCCCAGAGCTGAGGATTATGCTGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92961 lncRNA downstream 74770 39623354 ~ 39624793 (-) True G74469
TU92952 lncRNA downstream 108158 39590496 ~ 39591405 (-) False AMCG00014914
TU92932 lncRNA downstream 128157 39570678 ~ 39571406 (-) True G74446
TU92912 lncRNA downstream 199886 39498703 ~ 39499677 (-) True G74427
TU92896 lncRNA downstream 222459 39463079 ~ 39477104 (-) True G74414
TU93019 lncRNA upstream 33450 39736044 ~ 39736401 (-) True G74510
TU93021 lncRNA upstream 41534 39744128 ~ 39744359 (-) True G74512
TU93024 lncRNA upstream 51101 39753695 ~ 39753938 (-) True G74515
TU93159 lncRNA upstream 260336 39962930 ~ 40005067 (-) False G74597
TU93158 lncRNA upstream 284908 39987502 ~ 40005067 (-) True G74597
AMCG00014916 mRNA downstream 42001 39648804 ~ 39657562 (-) True AMCG00014916
AMCG00014917 mRNA downstream 58307 39640411 ~ 39641256 (-) True AMCG00014917
AMCG00014915 mRNA downstream 100067 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014914 mRNA downstream 107905 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014910 mRNA downstream 162720 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014920 mRNA upstream 59976 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014924 mRNA upstream 117969 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014927 mRNA upstream 256231 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014930 mRNA upstream 327178 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014935 mRNA upstream 383182 40085776 ~ 40107665 (-) True AMCG00014935
TU92969 other downstream 60606 39637899 ~ 39638957 (-) True G74477
TU92854 other downstream 439203 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 779210 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 1055025 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 1208623 38490323 ~ 38490940 (-) False AMCG00014891
TU93111 other upstream 198876 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 232299 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 242136 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 282100 39984694 ~ 40012081 (-) False G74593
TU93302 other upstream 533808 40236402 ~ 40236795 (-) False AMCG00014938

Expression Profile