RNA id: TU93014



Basic Information


Item Value
RNA id TU93014
length 534
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G74505
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39726466 ~ 39734537 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCACAGAGCTGCTGGACAAGATAGAGGAGATGGTGGCAGAGAACAGAGGAGACatgagagagacaggagagggagagacagaagagGAGAAAATTATGGGAGTGATGCCAATGATATATAAGCCAGGGAGGAAACCAAAGTACCTGTTAGGAGGAGGAACAGCATTACTGCCCCTCCATTCAtGAGTGGAGGAGCAGCTGCAGAGGGAAGCCCAGGAGAGACTGCAGCCCAGCCTGAGGCCTCCAGCTCTGAGGAGAAGACTGTGGAGAGGCCTGGAGCCCCGTGAGCACCGAGGAGGACCAGAGTCTGGGAGGCGGAGGACACTGCAGCCTGGACACACACTGAGTCTGGACACACACTGTtccaaataattgtaataataatgtaatatattaaacatttttgaatgattttaaaagttttttgtaCATTCCACTCCAATTCCAACTGGGATCCCGTTTCCTCTTGCCTGTCTCTGAATGTTATTACACCTTGGAGCCACAGAGCAGCACTGCAGCCCACAGAGAGCCCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92991 lncRNA upstream 11435 39682255 ~ 39722288 (+) False G74486
TU92992 lncRNA upstream 11435 39695162 ~ 39722288 (+) True G74486
TU92997 lncRNA upstream 73765 39659533 ~ 39659958 (+) True G74491
TU92983 lncRNA upstream 74211 39647829 ~ 39659512 (+) True G74484
TU92947 lncRNA upstream 131625 39601852 ~ 39602098 (+) True G74459
TU93020 lncRNA downstream 9588 39744125 ~ 39744360 (+) True G74511
TU93022 lncRNA downstream 17660 39752197 ~ 39752551 (+) True G74513
TU93025 lncRNA downstream 20853 39755390 ~ 39755664 (+) True G74516
TU93030 lncRNA downstream 61575 39796112 ~ 39840618 (+) True G74521
TU93093 lncRNA downstream 252965 39987502 ~ 40006654 (+) True G74557
AMCG00014918 mRNA upstream 25971 39707534 ~ 39707752 (+) True AMCG00014918
AMCG00014919 mRNA upstream 26290 39707061 ~ 39707433 (+) True AMCG00014919
AMCG00014911 mRNA upstream 97162 39630690 ~ 39636561 (+) True AMCG00014911
AMCG00014912 mRNA upstream 107523 39623426 ~ 39626200 (+) True AMCG00014912
AMCG00014913 mRNA upstream 112705 39618808 ~ 39621018 (+) False AMCG00014913
AMCG00014922 mRNA downstream 97931 39832468 ~ 39846425 (+) True AMCG00014922
AMCG00014923 mRNA downstream 136898 39871435 ~ 39875105 (+) False AMCG00014923
AMCG00014921 mRNA downstream 141663 39876200 ~ 39887566 (+) True AMCG00014921
AMCG00014926 mRNA downstream 153563 39888100 ~ 39899640 (+) True AMCG00014926
AMCG00014925 mRNA downstream 216652 39951189 ~ 39953278 (+) True AMCG00014925
TU92948 other upstream 112537 39606887 ~ 39621186 (+) True AMCG00014913
TU92814 other upstream 257904 39336268 ~ 39475819 (+) True G74348
TU92678 other upstream 922595 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 1300862 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 2215317 37518108 ~ 37518406 (+) True G73850
TU93044 other downstream 130545 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 131083 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 138603 39873140 ~ 39875428 (+) True AMCG00014923
TU93074 other downstream 216651 39951188 ~ 39953257 (+) False AMCG00014925
TU93084 other downstream 229231 39963768 ~ 39972411 (+) True AMCG00014928

Expression Profile