RNA id: TU93019



Basic Information


Item Value
RNA id TU93019
length 358
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G74510
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39736044 ~ 39736401 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAACGGGATTCCGCACTCCTGCAAACAGATAACATCCGCCTTCATTccagccagagagtttaaaacatcggtcctctttttcacctcagcaatgctcctcacatttattgatataataattaatgcCATGATGGCTGTGAGGGCAATTACCCGCTCcgtaacaatcatgtaaagaaaccttTCTCTTCCCCactcctctcttctccctcacctagcttAGCACTAGCACCCATCATTTCAATCATTTGCCTCACCGCTTGATCCTCTAGGAAGACTATGGGGGGGGCTCGGCTCCCGCCACCCGGTAAGGCTGGCGAAACTCCACTGGGCTCAGGGCCTGTGGTGCTGGAGGTTCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93009 lncRNA downstream 33450 39699563 ~ 39702594 (-) True G74501
TU92961 lncRNA downstream 111251 39623354 ~ 39624793 (-) True G74469
TU92952 lncRNA downstream 144639 39590496 ~ 39591405 (-) False AMCG00014914
TU92932 lncRNA downstream 164638 39570678 ~ 39571406 (-) True G74446
TU92912 lncRNA downstream 236367 39498703 ~ 39499677 (-) True G74427
TU93021 lncRNA upstream 7727 39744128 ~ 39744359 (-) True G74512
TU93024 lncRNA upstream 17294 39753695 ~ 39753938 (-) True G74515
TU93159 lncRNA upstream 226529 39962930 ~ 40005067 (-) False G74597
TU93158 lncRNA upstream 251101 39987502 ~ 40005067 (-) True G74597
TU93149 lncRNA upstream 274668 40011069 ~ 40012081 (-) False G74593
AMCG00014916 mRNA downstream 78482 39648804 ~ 39657562 (-) True AMCG00014916
AMCG00014917 mRNA downstream 94788 39640411 ~ 39641256 (-) True AMCG00014917
AMCG00014915 mRNA downstream 136548 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014914 mRNA downstream 144386 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014910 mRNA downstream 199201 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014920 mRNA upstream 26169 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014924 mRNA upstream 84162 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014927 mRNA upstream 222424 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014930 mRNA upstream 293371 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014935 mRNA upstream 349375 40085776 ~ 40107665 (-) True AMCG00014935
TU92969 other downstream 97087 39637899 ~ 39638957 (-) True G74477
TU92854 other downstream 475684 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 815691 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 1091506 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 1245104 38490323 ~ 38490940 (-) False AMCG00014891
TU93111 other upstream 165069 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 198492 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 208329 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 248293 39984694 ~ 40012081 (-) False G74593
TU93302 other upstream 500001 40236402 ~ 40236795 (-) False AMCG00014938

Expression Profile