RNA id: TU93021


Basic Information

Item Value
RNA id TU93021
length 232
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G74512
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39744128 ~ 39744359 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtttttatcacctacaggcccctttctccagacatctcatagcagaattccaaactatttggcctcttctcggtgccatcctccccaaaactgtcactttgatgcaaaccagttccaagctgatgagctaaggaaatctgataactttggggggggagaggtcttctttagatcagtgcttcagctcagagcccaaatgctcttatcaaaatacacccaacataacgctaca

Function

GO:

id name namespace
GO:0030900 forebrain development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93019 lncRNA downstream 7727 39736044 ~ 39736401 (-) True G74510
TU93009 lncRNA downstream 41534 39699563 ~ 39702594 (-) True G74501
TU92961 lncRNA downstream 119335 39623354 ~ 39624793 (-) True G74469
TU92952 lncRNA downstream 152723 39590496 ~ 39591405 (-) False AMCG00014914
TU92932 lncRNA downstream 172722 39570678 ~ 39571406 (-) True G74446
TU93024 lncRNA upstream 9336 39753695 ~ 39753938 (-) True G74515
TU93159 lncRNA upstream 218571 39962930 ~ 40005067 (-) False G74597
TU93158 lncRNA upstream 243143 39987502 ~ 40005067 (-) True G74597
TU93149 lncRNA upstream 266710 40011069 ~ 40012081 (-) False G74593
TU93150 lncRNA upstream 266710 40011069 ~ 40012081 (-) False G74593
AMCG00014916 mRNA downstream 86566 39648804 ~ 39657562 (-) True AMCG00014916
AMCG00014917 mRNA downstream 102872 39640411 ~ 39641256 (-) True AMCG00014917
AMCG00014915 mRNA downstream 144632 39592614 ~ 39599496 (-) True AMCG00014915
AMCG00014914 mRNA downstream 152470 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014910 mRNA downstream 207285 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014920 mRNA upstream 18211 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014924 mRNA upstream 76204 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014927 mRNA upstream 214466 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014930 mRNA upstream 285413 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014935 mRNA upstream 341417 40085776 ~ 40107665 (-) True AMCG00014935
TU92969 other downstream 105171 39637899 ~ 39638957 (-) True G74477
TU92854 other downstream 483768 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 823775 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 1099590 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 1253188 38490323 ~ 38490940 (-) False AMCG00014891
TU93111 other upstream 157111 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 190534 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 200371 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 240335 39984694 ~ 40012081 (-) False G74593
TU93302 other upstream 492043 40236402 ~ 40236795 (-) False AMCG00014938

Expression Profile