RNA id: TU93025



Basic Information


Item Value
RNA id TU93025
length 275
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G74516
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39755390 ~ 39755664 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aggcaggaatgtttctgttactgagcgattgacactaggtaaatgaccaccgtgggatcgcatcttcctagtgcacatcaaagacggacatcttCTTTTTatatccatcacctcttcacgggaggacagatcataaacggacccggacctgtatcttctgattggatgaacggccataagatgttatgtcattttccctataaaagttgtactcatgtctgtaaacattaagcctcactgaaggaattatttctgacagtggagcttccgagcgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93022 lncRNA upstream 2839 39752197 ~ 39752551 (+) True G74513
TU93020 lncRNA upstream 11030 39744125 ~ 39744360 (+) True G74511
TU93013 lncRNA upstream 20853 39726466 ~ 39734537 (+) True G74505
TU93014 lncRNA upstream 20853 39733723 ~ 39734537 (+) False G74505
TU92991 lncRNA upstream 33102 39682255 ~ 39722288 (+) False G74486
TU93030 lncRNA downstream 40448 39796112 ~ 39840618 (+) True G74521
TU93093 lncRNA downstream 231838 39987502 ~ 40006654 (+) True G74557
TU93177 lncRNA downstream 346229 40101893 ~ 40138259 (+) True G74615
TU93222 lncRNA downstream 475953 40231617 ~ 40231881 (+) True G74647
TU93224 lncRNA downstream 477110 40232774 ~ 40233420 (+) True G74649
AMCG00014918 mRNA upstream 47638 39707534 ~ 39707752 (+) True AMCG00014918
AMCG00014919 mRNA upstream 47957 39707061 ~ 39707433 (+) True AMCG00014919
AMCG00014911 mRNA upstream 118829 39630690 ~ 39636561 (+) True AMCG00014911
AMCG00014912 mRNA upstream 129190 39623426 ~ 39626200 (+) True AMCG00014912
AMCG00014913 mRNA upstream 134372 39618808 ~ 39621018 (+) False AMCG00014913
AMCG00014922 mRNA downstream 76804 39832468 ~ 39846425 (+) True AMCG00014922
AMCG00014923 mRNA downstream 115771 39871435 ~ 39875105 (+) False AMCG00014923
AMCG00014921 mRNA downstream 120536 39876200 ~ 39887566 (+) True AMCG00014921
AMCG00014926 mRNA downstream 132436 39888100 ~ 39899640 (+) True AMCG00014926
AMCG00014925 mRNA downstream 195525 39951189 ~ 39953278 (+) True AMCG00014925
TU92948 other upstream 134204 39606887 ~ 39621186 (+) True AMCG00014913
TU92814 other upstream 279571 39336268 ~ 39475819 (+) True G74348
TU92678 other upstream 944262 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 1322529 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 2236984 37518108 ~ 37518406 (+) True G73850
TU93044 other downstream 109418 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 109956 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 117476 39873140 ~ 39875428 (+) True AMCG00014923
TU93074 other downstream 195524 39951188 ~ 39953257 (+) False AMCG00014925
TU93084 other downstream 208104 39963768 ~ 39972411 (+) True AMCG00014928

Expression Profile