RNA id: TU93199


Basic Information

Item Value
RNA id TU93199
length 270
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G74633
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40128921 ~ 40129366 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AATAGCCCTGCCCCCACCTCAGAGGATGCCCCTCCTCTGTGTGCTCAGATGTCGGTGTTGTTATGCAAGTTGCCCCCgtacaacacagcacagagcacagcaaaCACCAAGCAAggggGAGCAGCAATGGCCTCGGAGGGAGAGAAAATCACCAATGTTAAGATCATTAACAGCCTGAGTAACCTACAGGACAGACTGAACTTCTACAGCACCTGGGCCCCCACTCACGAGCAGGTACCTTGGTCCTCGGGGCAAACGGCAGCACACAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93173 lncRNA downstream 85631 40043007 ~ 40043290 (-) True G74611
TU93149 lncRNA downstream 116840 40011069 ~ 40012081 (-) False G74593
TU93150 lncRNA downstream 116840 40011069 ~ 40012081 (-) False G74593
TU93153 lncRNA downstream 116840 40011069 ~ 40012081 (-) False G74593
TU93158 lncRNA downstream 123854 39987502 ~ 40005067 (-) True G74597
TU93315 lncRNA upstream 167495 40296861 ~ 40299179 (-) True G74725
TU93327 lncRNA upstream 208698 40338064 ~ 40340395 (-) True G74736
TU93328 lncRNA upstream 208698 40338064 ~ 40360225 (-) False G74736
TU93330 lncRNA upstream 236594 40365960 ~ 40368045 (-) True G74738
TU93465 lncRNA upstream 306074 40435440 ~ 40435670 (-) True G74845
AMCG00014935 mRNA downstream 21256 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014930 mRNA downstream 89596 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014927 mRNA downstream 167925 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014924 mRNA downstream 306832 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014920 mRNA downstream 364281 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014933 mRNA upstream 24053 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014934 mRNA upstream 33020 40162386 ~ 40164580 (-) True AMCG00014934
AMCG00014938 mRNA upstream 105692 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014946 mRNA upstream 151828 40281194 ~ 40292569 (-) True AMCG00014946
AMCG00014945 mRNA upstream 179521 40308887 ~ 40315938 (-) True AMCG00014945
TU93148 other downstream 116840 39934893 ~ 40012081 (-) True G74593
TU93152 other downstream 116840 39984694 ~ 40012081 (-) False G74593
TU93111 other downstream 145525 39901470 ~ 39983396 (-) True G74569
TU93146 other downstream 177851 39944730 ~ 39951070 (-) True G74591
TU92969 other downstream 489964 39637899 ~ 39638957 (-) True G74477
TU93302 other upstream 107036 40236402 ~ 40236795 (-) False AMCG00014938
TU93314 other upstream 162790 40292156 ~ 40294526 (-) False AMCG00014946
TU93316 other upstream 173865 40303231 ~ 40304085 (-) True G74726
TU93349 other upstream 272417 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 307973 40437339 ~ 40534709 (-) False AMCG00014949

Expression Profile