RNA id: TU93269



Basic Information


Item Value
RNA id TU93269
length 665
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G74683
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40396298 ~ 40397074 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


acctgctctctctcctcaggTTGACTATGAACACCAGCAGGTCGATTCGGGGCCGAGAGCCCTCCCCCTGgactgggagagggagagagcgagccATCctcctgagagagggagggagggagttaCTACAGACACAGActgcctgacacactgactgactgcctgactaAAGCTCCCTGATGCACTGATGGCCAGGCCcaggtgtgtgcagtgtgtgcagtgtcccAGGTGtgagcagtgtgtgtagtgctccaggtgtgtgcagtgtgtgtagtgctccaggtgtgtgcagtgtgtgcagtgtcccAGGTGTGAGCAGAGTGTGTAGTGCTCCAGGTGTGAGCAGTGTGTGTAGAGCTCCAGGCCCAGGTGTGTGTAGTGTCCCAGGTGTGAGCAGAGTGTGTAGTGCTCCAGGTGTGTGCAGGTTGAAACTCTCACACGTTGGTGTTGAAGTCTTTGTCCTGCAGTAGAATGGCTTCAGCCAGCCGGCCCTGCAGCTCCATCTCCGCCTCCACCagctgcacaacacaacaccacagCAAAATGACACAGcaccacacacagcaacacaacacgACAGCATGACACAGcaccacacacagcaacacaacaacacGACAACATGACACAGcaccacacacagcaacacGACAGCATGACACAGN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93239 lncRNA upstream 16545 40303232 ~ 40379753 (+) True G74661
TU93257 lncRNA upstream 46460 40342595 ~ 40349838 (+) True G74672
TU93234 lncRNA upstream 110160 40284901 ~ 40286138 (+) True G74656
TU93224 lncRNA upstream 162878 40232774 ~ 40233420 (+) True G74649
TU93222 lncRNA upstream 164417 40231617 ~ 40231881 (+) True G74647
TU93276 lncRNA downstream 13807 40410881 ~ 40413637 (+) True G74690
TU93372 lncRNA downstream 92127 40489201 ~ 40491346 (+) True G74768
TU93374 lncRNA downstream 132640 40529714 ~ 40530310 (+) True G74769
TU93383 lncRNA downstream 249107 40646181 ~ 40646393 (+) True G74778
TU93387 lncRNA downstream 304345 40701419 ~ 40701849 (+) True G74782
AMCG00014947 mRNA upstream 5092 40387906 ~ 40391206 (+) True AMCG00014947
AMCG00014941 mRNA upstream 10669 40382282 ~ 40385629 (+) True AMCG00014941
AMCG00014942 mRNA upstream 22428 40371393 ~ 40373870 (+) False AMCG00014942
AMCG00014940 mRNA upstream 56009 40338242 ~ 40340289 (+) True AMCG00014940
AMCG00014943 mRNA upstream 65373 40324822 ~ 40330925 (+) True AMCG00014943
AMCG00014948 mRNA downstream 22500 40419574 ~ 40437283 (+) True AMCG00014948
AMCG00014954 mRNA downstream 133318 40530392 ~ 40532273 (+) True AMCG00014954
AMCG00014956 mRNA downstream 330728 40727802 ~ 40729957 (+) True AMCG00014956
AMCG00014955 mRNA downstream 348622 40745696 ~ 40759910 (+) True AMCG00014955
AMCG00014961 mRNA downstream 618794 41015868 ~ 41035772 (+) True AMCG00014961
TU93243 other upstream 22435 40331987 ~ 40373863 (+) False AMCG00014942
TU93241 other upstream 22435 40369137 ~ 40373863 (+) True AMCG00014942
TU93250 other upstream 55903 40338215 ~ 40340395 (+) False AMCG00014940
TU93215 other upstream 232301 40162016 ~ 40163997 (+) True G74643
TU93214 other upstream 235720 40159901 ~ 40160578 (+) True G74642
TU93363 other downstream 97837 40494911 ~ 40530521 (+) False AMCG00014954
TU93411 other downstream 492900 40889974 ~ 40990904 (+) True G74803
TU93556 other downstream 692701 41089775 ~ 41090612 (+) True G74925
TU93587 other downstream 816876 41213950 ~ 41215242 (+) True G74952
TU93640 other downstream 937469 41334543 ~ 41335049 (+) False AMCG00014963

Expression Profile