RNA id: TU93465



Basic Information


Item Value
RNA id TU93465
length 231
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G74845
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40435440 ~ 40435670 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


caaaatgtcaaataacCACCCCGGCCGCTGAATATCACCAGACTTACTTTCACCGGTTTGGGTAAAATGGCGCCCGAGGCCGTGGTGACCGCGGTCCGGCTCACAGTCAGCGGGACAGTCGCAGCGCTGCGGTTCTGCCTGCAAAAGCCACCATTTCTCTGGGCGAGAAGCCGAGCGGAGCCCAGCGCACAGCGAGCCGCAGCCGACGCCATCTTAGCGAGCGAGTGCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93330 lncRNA downstream 67395 40365960 ~ 40368045 (-) True G74738
TU93328 lncRNA downstream 75215 40338064 ~ 40360225 (-) False G74736
TU93327 lncRNA downstream 95045 40338064 ~ 40340395 (-) True G74736
TU93315 lncRNA downstream 136261 40296861 ~ 40299179 (-) True G74725
TU93190 lncRNA downstream 296339 40101893 ~ 40139101 (-) True G74625
TU93475 lncRNA upstream 210512 40646182 ~ 40646384 (-) True G74854
TU93481 lncRNA upstream 260317 40695987 ~ 40696241 (-) True G74860
TU93485 lncRNA upstream 268241 40703911 ~ 40704607 (-) True G74864
TU93496 lncRNA upstream 386024 40821694 ~ 40822155 (-) True G74875
TU93502 lncRNA upstream 436093 40871763 ~ 40871994 (-) True G74880
AMCG00014950 mRNA downstream 4398 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014953 mRNA downstream 18712 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014951 mRNA downstream 24663 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014952 mRNA downstream 36884 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014944 mRNA downstream 75738 40348222 ~ 40359702 (-) True AMCG00014944
AMCG00014949 mRNA upstream 1589 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014957 mRNA upstream 450345 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014958 mRNA upstream 470555 40906225 ~ 40909451 (-) True AMCG00014958
AMCG00014959 mRNA upstream 476524 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014962 mRNA upstream 554002 40989672 ~ 40990791 (-) True AMCG00014962
TU93349 other downstream 30112 40401783 ~ 40405328 (-) False AMCG00014951
TU93316 other downstream 131355 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 140914 40292156 ~ 40294526 (-) False AMCG00014946
TU93302 other downstream 198645 40236402 ~ 40236795 (-) False AMCG00014938
TU93152 other downstream 423359 39984694 ~ 40012081 (-) False G74593
TU93466 other upstream 1669 40437339 ~ 40534709 (-) False AMCG00014949
TU93483 other upstream 262183 40697853 ~ 40698276 (-) True G74862
TU93491 other upstream 347170 40782840 ~ 40783230 (-) True G74870
TU93508 other upstream 470711 40906381 ~ 40909386 (-) False AMCG00014958
TU93511 other upstream 487294 40922964 ~ 40925437 (-) True G74887

Expression Profile