RNA id: TU93483



Basic Information


Item Value
RNA id TU93483
length 424
RNA type TUCP
GC content 0.47
exon number 1
gene id G74862
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40697853 ~ 40698276 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agaggggcgagGGACTGTGAAGTCAATCCTGAATCCGCTCCCGTCTGTGCGCTTCGCACTCGGGCTGCAGTGAAGCGCATGTTAAGGACGAGCGACACAGAGACGAGTTCAATACATGACAGTATGAGAAGACGAAGTCATTCAGAAGACACAGACAGCTCTGATGATCCTCAAGTCAGTCATGAGCCTCAGACGACTAAGCGTCTGACTGCTCTGGAACTGAGAGCTTTCAGAGATGATTTGGGTCCAATTACTCTAGAGACAGATTTAGAGGAATTAATAATTCGACTTTTATCTTGCATTCAGTTACACCCACAACTGAACGACCTGCATTGGAAAACAATAGTTTTAGCTGCTTGTTCTCCAACTTTAAGATCCCTGTTAAGTGTTGATGAAGTGGGGAGAGCGATTTCGTGGACTGAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93481 lncRNA downstream 1612 40695987 ~ 40696241 (-) True G74860
TU93475 lncRNA downstream 51469 40646182 ~ 40646384 (-) True G74854
TU93465 lncRNA downstream 262183 40435440 ~ 40435670 (-) True G74845
TU93330 lncRNA downstream 329808 40365960 ~ 40368045 (-) True G74738
TU93328 lncRNA downstream 337628 40338064 ~ 40360225 (-) False G74736
TU93485 lncRNA upstream 5635 40703911 ~ 40704607 (-) True G74864
TU93496 lncRNA upstream 123418 40821694 ~ 40822155 (-) True G74875
TU93502 lncRNA upstream 173487 40871763 ~ 40871994 (-) True G74880
TU93504 lncRNA upstream 183916 40882192 ~ 40882423 (-) True G74882
TU93534 lncRNA upstream 301577 40999853 ~ 41000652 (-) True G74905
AMCG00014949 mRNA downstream 259704 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014950 mRNA downstream 266811 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014953 mRNA downstream 281125 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014951 mRNA downstream 287076 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014952 mRNA downstream 299297 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014957 mRNA upstream 187739 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014958 mRNA upstream 207949 40906225 ~ 40909451 (-) True AMCG00014958
AMCG00014959 mRNA upstream 213918 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014962 mRNA upstream 291396 40989672 ~ 40990791 (-) True AMCG00014962
AMCG00014967 mRNA upstream 479608 41177884 ~ 41226807 (-) True AMCG00014967
TU93466 other downstream 163144 40437339 ~ 40534709 (-) False AMCG00014949
TU93349 other downstream 292525 40401783 ~ 40405328 (-) False AMCG00014951
TU93316 other downstream 393768 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 403327 40292156 ~ 40294526 (-) False AMCG00014946
TU93302 other downstream 461058 40236402 ~ 40236795 (-) False AMCG00014938
TU93491 other upstream 84564 40782840 ~ 40783230 (-) True G74870
TU93508 other upstream 208105 40906381 ~ 40909386 (-) False AMCG00014958
TU93511 other upstream 224688 40922964 ~ 40925437 (-) True G74887
TU93516 other upstream 233521 40931797 ~ 40933954 (-) True G74890
TU93577 other upstream 470765 41169041 ~ 41169551 (-) True G74945

Expression Profile