RNA id: TU93491


Basic Information

Item Value
RNA id TU93491
length 391
RNA type TUCP
GC content 0.51
exon number 1
gene id G74870
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40782840 ~ 40783230 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggacaggacaactgcaccgcatcaaagggacgatggacggggccatgtaccgtcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggatggagctgaaggttcgagttgccaaacgtcagccttgaaacctgaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93485 lncRNA downstream 78233 40703911 ~ 40704607 (-) True G74864
TU93481 lncRNA downstream 86599 40695987 ~ 40696241 (-) True G74860
TU93475 lncRNA downstream 136456 40646182 ~ 40646384 (-) True G74854
TU93465 lncRNA downstream 347170 40435440 ~ 40435670 (-) True G74845
TU93330 lncRNA downstream 414795 40365960 ~ 40368045 (-) True G74738
TU93496 lncRNA upstream 38464 40821694 ~ 40822155 (-) True G74875
TU93502 lncRNA upstream 88533 40871763 ~ 40871994 (-) True G74880
TU93504 lncRNA upstream 98962 40882192 ~ 40882423 (-) True G74882
TU93534 lncRNA upstream 216623 40999853 ~ 41000652 (-) True G74905
TU93541 lncRNA upstream 258868 41042098 ~ 41043583 (-) True G74910
AMCG00014949 mRNA downstream 344691 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014950 mRNA downstream 351798 40429382 ~ 40431042 (-) True AMCG00014950
AMCG00014953 mRNA downstream 366112 40410874 ~ 40416728 (-) True AMCG00014953
AMCG00014951 mRNA downstream 372063 40402766 ~ 40410777 (-) True AMCG00014951
AMCG00014952 mRNA downstream 384284 40394503 ~ 40398556 (-) True AMCG00014952
AMCG00014957 mRNA upstream 102785 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014958 mRNA upstream 122995 40906225 ~ 40909451 (-) True AMCG00014958
AMCG00014959 mRNA upstream 128964 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014962 mRNA upstream 206442 40989672 ~ 40990791 (-) True AMCG00014962
AMCG00014967 mRNA upstream 394654 41177884 ~ 41226807 (-) True AMCG00014967
TU93483 other downstream 84564 40697853 ~ 40698276 (-) True G74862
TU93466 other downstream 248131 40437339 ~ 40534709 (-) False AMCG00014949
TU93349 other downstream 377512 40401783 ~ 40405328 (-) False AMCG00014951
TU93316 other downstream 478755 40303231 ~ 40304085 (-) True G74726
TU93314 other downstream 488314 40292156 ~ 40294526 (-) False AMCG00014946
TU93508 other upstream 123151 40906381 ~ 40909386 (-) False AMCG00014958
TU93511 other upstream 139734 40922964 ~ 40925437 (-) True G74887
TU93516 other upstream 148567 40931797 ~ 40933954 (-) True G74890
TU93577 other upstream 385811 41169041 ~ 41169551 (-) True G74945
TU93668 other upstream 546083 41329313 ~ 41331666 (-) True AMCG00014964

Expression Profile