RNA id: TU93582



Basic Information


Item Value
RNA id TU93582
length 273
lncRNA type intronic
GC content 0.48
exon number 1
gene id G74950
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41211039 ~ 41211311 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTCTCCAGCAGCTCTGAGACCTGAGTCTgattgtttgtgtctctgttgtTGAAGACGTGGTACCGGACGCCACAGGTCTGGATAAAGTTCTGGAGATTCTTTTCACAGTTTCTAATATAATCATTTACAGATTGACCCTCCAAGTCGTCGTCCCGTGTGAACAGCACCATGGTGTATTCAGATGTTCTTTCTCCAAAGGTCTCCTGGATCAgcttcactgtgtctctctTCTCCTGAGTGAATCTCCCCACCATGAGCACCACCAGGAACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93541 lncRNA downstream 167456 41042098 ~ 41043583 (-) True G74910
TU93534 lncRNA downstream 210387 40999853 ~ 41000652 (-) True G74905
TU93504 lncRNA downstream 328616 40882192 ~ 40882423 (-) True G74882
TU93502 lncRNA downstream 339045 40871763 ~ 40871994 (-) True G74880
TU93496 lncRNA downstream 388884 40821694 ~ 40822155 (-) True G74875
TU93609 lncRNA upstream 51457 41262768 ~ 41263907 (-) True G74970
TU93617 lncRNA upstream 58616 41269927 ~ 41270183 (-) True G74978
TU93682 lncRNA upstream 194151 41405462 ~ 41405799 (-) True G75032
TU93685 lncRNA upstream 195606 41406917 ~ 41409612 (-) True G75035
TU93716 lncRNA upstream 238779 41450090 ~ 41451333 (-) True G75064
AMCG00014962 mRNA downstream 220248 40989672 ~ 40990791 (-) True AMCG00014962
AMCG00014959 mRNA downstream 288173 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014958 mRNA downstream 301588 40906225 ~ 40909451 (-) True AMCG00014958
AMCG00014957 mRNA downstream 312339 40886015 ~ 40898700 (-) True AMCG00014957
AMCG00014949 mRNA downstream 772890 40437259 ~ 40438149 (-) True AMCG00014949
AMCG00014964 mRNA upstream 119127 41330438 ~ 41331770 (-) False AMCG00014964
AMCG00014972 mRNA upstream 202101 41413412 ~ 41416011 (-) True AMCG00014972
AMCG00014974 mRNA upstream 210550 41421861 ~ 41435628 (-) True AMCG00014974
AMCG00014973 mRNA upstream 241132 41452443 ~ 41460863 (-) True AMCG00014973
AMCG00014975 mRNA upstream 252283 41463594 ~ 41469552 (-) True AMCG00014975
TU93577 other downstream 41488 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 277085 40931797 ~ 40933954 (-) True G74890
TU93511 other downstream 285602 40922964 ~ 40925437 (-) True G74887
TU93508 other downstream 301653 40906381 ~ 40909386 (-) False AMCG00014958
TU93491 other downstream 427809 40782840 ~ 40783230 (-) True G74870
TU93668 other upstream 118002 41329313 ~ 41331666 (-) True AMCG00014964
TU93726 other upstream 258983 41470294 ~ 41472194 (-) True AMCG00014971
TU93975 other upstream 907976 42119287 ~ 42131232 (-) True G75272
TU94096 other upstream 1080610 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 1297558 42508869 ~ 42513574 (-) False AMCG00015031

Expression Profile