RNA id: TU93682



Basic Information


Item Value
RNA id TU93682
length 338
lncRNA type inter_gene
GC content 0.66
exon number 1
gene id G75032
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41405462 ~ 41405799 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctcgccccctccctgtctctctctctctccccgcccCTTGCTATGTTTCAGGGCCGAGAGAGGGTGGTGTAGACCGGCTGCTCCCAGTGGGTGGGGCTGTGGGACTGGGGCACGCTGGAGGGGTCGGCGATGGCCGTATACAGGGGTCTCTGTGTGGGGCCCATATAGGAAAAGGCAGAGTATAACCCCGAGGGCTGGCCCGAGTGACTGTAGTAGGAGCTGGAGGTCTGGTGGTCAGGGTAGTCGAACTGGGCACGGCTGGCCAGCGCCGGGAAGGCCGAGCCGTAGTGGGGTAGGCTGAGGGGGGTGTATGTGAGCTGGGACCCGGGGGGCTGCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93617 lncRNA downstream 135279 41269927 ~ 41270183 (-) True G74978
TU93609 lncRNA downstream 141555 41262768 ~ 41263907 (-) True G74970
TU93582 lncRNA downstream 194151 41211039 ~ 41211311 (-) True G74950
TU93541 lncRNA downstream 361879 41042098 ~ 41043583 (-) True G74910
TU93534 lncRNA downstream 404810 40999853 ~ 41000652 (-) True G74905
TU93685 lncRNA upstream 1118 41406917 ~ 41409612 (-) True G75035
TU93716 lncRNA upstream 44291 41450090 ~ 41451333 (-) True G75064
TU93744 lncRNA upstream 147658 41553457 ~ 41554704 (-) False AMCG00014978
TU93821 lncRNA upstream 245537 41651336 ~ 41673042 (-) True G75145
TU93820 lncRNA upstream 264357 41670156 ~ 41672310 (-) True G75144
AMCG00014964 mRNA downstream 73692 41330438 ~ 41331770 (-) False AMCG00014964
AMCG00014967 mRNA downstream 178655 41177884 ~ 41226807 (-) True AMCG00014967
AMCG00014962 mRNA downstream 414671 40989672 ~ 40990791 (-) True AMCG00014962
AMCG00014959 mRNA downstream 482596 40912194 ~ 40922866 (-) True AMCG00014959
AMCG00014958 mRNA downstream 496011 40906225 ~ 40909451 (-) True AMCG00014958
AMCG00014972 mRNA upstream 7613 41413412 ~ 41416011 (-) True AMCG00014972
AMCG00014974 mRNA upstream 16062 41421861 ~ 41435628 (-) True AMCG00014974
AMCG00014973 mRNA upstream 46644 41452443 ~ 41460863 (-) True AMCG00014973
AMCG00014975 mRNA upstream 57795 41463594 ~ 41469552 (-) True AMCG00014975
AMCG00014971 mRNA upstream 65015 41470814 ~ 41474481 (-) False AMCG00014971
TU93668 other downstream 73796 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 235911 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 471508 40931797 ~ 40933954 (-) True G74890
TU93511 other downstream 480025 40922964 ~ 40925437 (-) True G74887
TU93508 other downstream 496076 40906381 ~ 40909386 (-) False AMCG00014958
TU93726 other upstream 64495 41470294 ~ 41472194 (-) True AMCG00014971
TU93975 other upstream 713488 42119287 ~ 42131232 (-) True G75272
TU94096 other upstream 886122 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 1103070 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 1117920 42523719 ~ 42534278 (-) False AMCG00015028

Expression Profile