RNA id: TU94054



Basic Information


Item Value
RNA id TU94054
length 228
lncRNA type inter_gene
GC content 0.58
exon number 2
gene id G75333
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42167524 ~ 42167876 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCCGCTTGGCCCCCAGTTTGAGCAGCTTGTCTGGAGAGGGGAAGGAGAGGAAGGTGGAGATGTCTGGGGGATGAGGGGATGACACTGGAGTGGACACCGTGCTCTGGAGTTTGACTGCACTGCTGCCTTCTTTTCTCTCCTGcccctcctcctcatcttcctCTGCCTCATtctcatcttcctcctcctcctcctcgtcctcctcctcttcatcttccccctcttcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93955 lncRNA downstream 103623 42060378 ~ 42063901 (-) True AMCG00015010
TU93949 lncRNA downstream 145443 41993563 ~ 42022081 (-) True G75247
TU93942 lncRNA downstream 175547 41977755 ~ 41991977 (-) True G75241
TU93849 lncRNA downstream 352263 41812333 ~ 41815261 (-) True G75170
TU93838 lncRNA downstream 400709 41765532 ~ 41766815 (-) False AMCG00014981
TU94090 lncRNA upstream 118418 42286294 ~ 42286584 (-) True G75364
TU94091 lncRNA upstream 118782 42286658 ~ 42286893 (-) True G75365
TU94093 lncRNA upstream 121313 42289189 ~ 42289415 (-) True G75367
TU94094 lncRNA upstream 121714 42289590 ~ 42289858 (-) True G75368
TU94095 lncRNA upstream 122033 42289909 ~ 42290266 (-) True G75369
AMCG00015009 mRNA downstream 20286 42134913 ~ 42147238 (-) True AMCG00015009
AMCG00015011 mRNA downstream 33075 42130045 ~ 42134449 (-) True AMCG00015011
AMCG00015012 mRNA downstream 43652 42121663 ~ 42123872 (-) True AMCG00015012
AMCG00015006 mRNA downstream 55383 42106897 ~ 42112141 (-) True AMCG00015006
AMCG00015007 mRNA downstream 70240 42083044 ~ 42097284 (-) True AMCG00015007
AMCG00015017 mRNA upstream 15812 42183688 ~ 42196495 (-) True AMCG00015017
AMCG00015016 mRNA upstream 28621 42196497 ~ 42213025 (-) True AMCG00015016
AMCG00015015 mRNA upstream 59022 42226898 ~ 42234065 (-) True AMCG00015015
AMCG00015020 mRNA upstream 141847 42309723 ~ 42313025 (-) True AMCG00015020
AMCG00015022 mRNA upstream 150918 42318794 ~ 42321081 (-) True AMCG00015022
TU93975 other downstream 36292 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 695330 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 835858 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 997973 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 1233570 40931797 ~ 40933954 (-) True G74890
TU94096 other upstream 124045 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 340993 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 355843 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 632275 42800151 ~ 42803287 (-) True G75497

Expression Profile