RNA id: TU94091


Basic Information

Item Value
RNA id TU94091
length 236
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G75365
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42286658 ~ 42286893 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTTTCCCTTACTTTTCCTCTTGCTCTGGGCTGTGCTGGGGGAGCTGTGAGTGGACGGTGAGCCTGatccctcctcttcctctttagGCTCCACCTTCACCTCAGGCTTCCTGTCTTCCCCAGTCACCGCCGACGATGCCTCCATTGGCTCCGCCTTGCCACCCTCCCctccacctggctcctccttcttTACCTGCAAACAGAGAGGGGATGAAAACCCCGGACATTAAGACAAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94090 lncRNA downstream 74 42286294 ~ 42286584 (-) True G75364
TU94054 lncRNA downstream 118782 42167524 ~ 42167876 (-) True G75333
TU93955 lncRNA downstream 222757 42060378 ~ 42063901 (-) True AMCG00015010
TU93949 lncRNA downstream 264577 41993563 ~ 42022081 (-) True G75247
TU93942 lncRNA downstream 294681 41977755 ~ 41991977 (-) True G75241
TU94093 lncRNA upstream 2296 42289189 ~ 42289415 (-) True G75367
TU94094 lncRNA upstream 2697 42289590 ~ 42289858 (-) True G75368
TU94095 lncRNA upstream 3016 42289909 ~ 42290266 (-) True G75369
TU94097 lncRNA upstream 6578 42293471 ~ 42293724 (-) True G75371
TU94098 lncRNA upstream 11452 42298345 ~ 42298792 (-) True G75372
AMCG00015015 mRNA downstream 52593 42226898 ~ 42234065 (-) True AMCG00015015
AMCG00015016 mRNA downstream 73633 42196497 ~ 42213025 (-) True AMCG00015016
AMCG00015017 mRNA downstream 90163 42183688 ~ 42196495 (-) True AMCG00015017
AMCG00015009 mRNA downstream 139420 42134913 ~ 42147238 (-) True AMCG00015009
AMCG00015011 mRNA downstream 152209 42130045 ~ 42134449 (-) True AMCG00015011
AMCG00015020 mRNA upstream 22830 42309723 ~ 42313025 (-) True AMCG00015020
AMCG00015022 mRNA upstream 31901 42318794 ~ 42321081 (-) True AMCG00015022
AMCG00015023 mRNA upstream 34924 42321817 ~ 42325005 (-) False AMCG00015023
AMCG00015021 mRNA upstream 39287 42326180 ~ 42332650 (-) True AMCG00015021
AMCG00015025 mRNA upstream 66608 42353501 ~ 42354515 (-) True AMCG00015025
TU93975 other downstream 155426 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 814464 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 954992 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 1117107 41169041 ~ 41169551 (-) True G74945
TU93516 other downstream 1352704 40931797 ~ 40933954 (-) True G74890
TU94096 other upstream 5028 42291921 ~ 42292295 (-) True G75370
TU94183 other upstream 221976 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 236826 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 513258 42800151 ~ 42803287 (-) True G75497

Expression Profile