RNA id: TU94099


Basic Information

Item Value
RNA id TU94099
length 226
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G75373
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42298917 ~ 42299142 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGTGCACAGAGTGCGTACAGTGCATGCGTTTGTGTTTTAGACTGTGTCCGGTTGGTCAGCATACCTCCTTGTGCTTCTCCATGGTGGCATACAGTTTCTGTGACAGGTCATTAGACACATTGGGCATGCCAGGCTTCTTCTTATTGGCTCTGCTCAGGCTGCTCTTGTTCTTACTGGTcttcttgttgttcttcttcttggCGCTTTTACTGTCCCCCTTTGTGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94098 lncRNA downstream 125 42298345 ~ 42298792 (-) True G75372
TU94097 lncRNA downstream 5193 42293471 ~ 42293724 (-) True G75371
TU94095 lncRNA downstream 8651 42289909 ~ 42290266 (-) True G75369
TU94094 lncRNA downstream 9059 42289590 ~ 42289858 (-) True G75368
TU94093 lncRNA downstream 9502 42289189 ~ 42289415 (-) True G75367
TU94100 lncRNA upstream 73 42299215 ~ 42299497 (-) True G75374
TU94109 lncRNA upstream 21954 42321096 ~ 42324920 (-) False AMCG00015023
TU94110 lncRNA upstream 21954 42321096 ~ 42324920 (-) True AMCG00015023
TU94121 lncRNA upstream 46508 42345650 ~ 42346781 (-) True G75384
TU94151 lncRNA upstream 177866 42477008 ~ 42487718 (-) True G75403
AMCG00015015 mRNA downstream 64852 42226898 ~ 42234065 (-) True AMCG00015015
AMCG00015016 mRNA downstream 85892 42196497 ~ 42213025 (-) True AMCG00015016
AMCG00015017 mRNA downstream 102422 42183688 ~ 42196495 (-) True AMCG00015017
AMCG00015009 mRNA downstream 151679 42134913 ~ 42147238 (-) True AMCG00015009
AMCG00015011 mRNA downstream 164468 42130045 ~ 42134449 (-) True AMCG00015011
AMCG00015020 mRNA upstream 10581 42309723 ~ 42313025 (-) True AMCG00015020
AMCG00015022 mRNA upstream 19652 42318794 ~ 42321081 (-) True AMCG00015022
AMCG00015023 mRNA upstream 22675 42321817 ~ 42325005 (-) False AMCG00015023
AMCG00015021 mRNA upstream 27038 42326180 ~ 42332650 (-) True AMCG00015021
AMCG00015025 mRNA upstream 54359 42353501 ~ 42354515 (-) True AMCG00015025
TU94096 other downstream 6622 42291921 ~ 42292295 (-) True G75370
TU93975 other downstream 167685 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 826723 41470294 ~ 41472194 (-) True AMCG00014971
TU93668 other downstream 967251 41329313 ~ 41331666 (-) True AMCG00014964
TU93577 other downstream 1129366 41169041 ~ 41169551 (-) True G74945
TU94183 other upstream 209727 42508869 ~ 42513574 (-) False AMCG00015031
TU94191 other upstream 224577 42523719 ~ 42534278 (-) False AMCG00015028
TU94277 other upstream 501009 42800151 ~ 42803287 (-) True G75497

Expression Profile