RNA id: TU94239


Basic Information

Item Value
RNA id TU94239
length 330
lncRNA type inter_gene
GC content 0.57
exon number 3
gene id G75467
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42641484 ~ 42646678 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGGGTCGTCTGTGGTGGTGACCGTGTGGAAGATCCTCTTGATGCTCTTGAGCTGCCTCTCGTTGCGCGTGGTCACTCGGTCGAACGCCTTGTCATAGTGCTCCAGAGCGCCACAGcactcaATGTCCAAGGGGTCAGCCACCTCCATGTAGCGCATCTTCATTAGCCGGGGGAAATCCATCTCCTCCTTCACCTCCCAGTCGCTCCGTACCTCCACTGAGGAGTCTCTGGGTTTCAGCTGTGACTTCTGGTCCCACTTTTGACGCACCCCAAACTGCTTCTGAAACTTCTTCTGCAGACGCATACGATCCCTGCACAGAGACGAGAGGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94238 lncRNA downstream 1182 42639306 ~ 42640881 (-) True G75466
TU94196 lncRNA downstream 52440 42587012 ~ 42589623 (-) False AMCG00015035
TU94188 lncRNA downstream 61923 42556629 ~ 42580140 (-) False AMCG00015035
TU94189 lncRNA downstream 61923 42575958 ~ 42580140 (-) True AMCG00015035
TU94155 lncRNA downstream 150139 42491710 ~ 42491924 (-) True G75406
TU94245 lncRNA upstream 58486 42705164 ~ 42705391 (-) True G75472
TU94287 lncRNA upstream 173355 42820033 ~ 42820232 (-) True G75507
AMCG00015034 mRNA downstream 3196 42636026 ~ 42638867 (-) True AMCG00015034
AMCG00015036 mRNA downstream 30456 42597937 ~ 42611607 (-) True AMCG00015036
AMCG00015035 mRNA downstream 52717 42580015 ~ 42589346 (-) False AMCG00015035
AMCG00015029 mRNA downstream 89503 42542587 ~ 42552560 (-) True AMCG00015029
AMCG00015028 mRNA downstream 117322 42523332 ~ 42524741 (-) True AMCG00015028
AMCG00015040 mRNA upstream 4267 42650945 ~ 42656759 (-) True AMCG00015040
TU94191 other downstream 107785 42523719 ~ 42534278 (-) False AMCG00015028
TU94183 other downstream 128489 42508869 ~ 42513574 (-) False AMCG00015031
TU94096 other downstream 349768 42291921 ~ 42292295 (-) True G75370
TU93975 other downstream 510831 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 1169869 41470294 ~ 41472194 (-) True AMCG00014971
TU94277 other upstream 153473 42800151 ~ 42803287 (-) True G75497

Expression Profile