RNA id: TU94277


Basic Information

Item Value
RNA id TU94277
length 459
RNA type TUCP
GC content 0.60
exon number 3
gene id G75497
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 42800151 ~ 42803287 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGTGCAGGTGTACCCGGGGGCTCCAGGTGAAGCGGGGATTGAGGAAGGCCTCTGCACTGCAGGGGCTCATGGGGTTAGGCTGGAAGGAGCCCAGGCCCTCGGGGGGCTGGAACATGAAGTCCTGTGGGGCGAAGGAGGAGGGGGCAAGGGCAGGGAGCGAGGCTGGAGTTTCTGCAGTGCTCTCAGCCTCCATTCCCCCCTCTGACGTAATAGGGGAGGGGTCCACAcattctctctccatctgtctctccctctctctctccatctcactcTCTGttggtctctccctctccatctcacTCTCCGTTggtctctccccctctgtcgGTCTCTCagtcattctctccctctcagttgGTTTCTGCTGCTCCTCATCCTTCTTTCTTATCTCTTTTCTCATCATCTCTCCGTTTCCTGGGGCTGCCCTGGCTCTGCTTGCAGGGGGCGCTACTGCCTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94245 lncRNA downstream 94760 42705164 ~ 42705391 (-) True G75472
TU94239 lncRNA downstream 153473 42642063 ~ 42646678 (-) False G75467
TU94241 lncRNA downstream 154440 42643753 ~ 42645711 (-) True G75468
TU94240 lncRNA downstream 157718 42641484 ~ 42642433 (-) True G75467
TU94238 lncRNA downstream 159270 42639306 ~ 42640881 (-) True G75466
TU94287 lncRNA upstream 16746 42820033 ~ 42820232 (-) True G75507
AMCG00015040 mRNA downstream 143392 42650945 ~ 42656759 (-) True AMCG00015040
AMCG00015034 mRNA downstream 161284 42636026 ~ 42638867 (-) True AMCG00015034
AMCG00015036 mRNA downstream 188544 42597937 ~ 42611607 (-) True AMCG00015036
AMCG00015035 mRNA downstream 210805 42580015 ~ 42589346 (-) False AMCG00015035
AMCG00015029 mRNA downstream 247591 42542587 ~ 42552560 (-) True AMCG00015029
TU94191 other downstream 265873 42523719 ~ 42534278 (-) False AMCG00015028
TU94183 other downstream 286577 42508869 ~ 42513574 (-) False AMCG00015031
TU94096 other downstream 507856 42291921 ~ 42292295 (-) True G75370
TU93975 other downstream 668919 42119287 ~ 42131232 (-) True G75272
TU93726 other downstream 1327957 41470294 ~ 41472194 (-) True AMCG00014971

Expression Profile