RNA id: TU119088



Basic Information


Item Value
RNA id TU119088
length 373
lncRNA type sense_over
GC content 0.55
exon number 2
gene id AMCG00015099
representative False

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2140341 ~ 2201333 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACCGCTGTCAATCCACCAACACCATTACTGACAGTTACCTGGAGGAATGGCCCCAGTGATGCAGCTCCACTAGTAATCACTTCAGCTCCTGGAGGGTCAATATACGGTGACGGGTACAAGGGCAGAGTCAGTGTGGACAGATCCACCGGCGCTCTGCAGATCACACAGCTGACACTGGGAGACACGGGGACGTACGGTGTCAACATTATAACTAATGCAGGTGCCACTCTGACTGGACAGGTGGAGCTCAGGGTCTACAAGATGATCAATAGTGTCACAGTGCTCCCTGCTGGGGAGGTGCCAGTAGCAGGTGGGAACCTGACTCTGAAGTGCTAGGCCAATGCCCCTGTGGAGTCCAGACAGTGGAGCAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119054 lncRNA downstream 10191 2128811 ~ 2130245 (-) True G95469
TU119023 lncRNA downstream 76832 2061212 ~ 2063604 (-) True G95447
TU119009 lncRNA downstream 115835 2021780 ~ 2024601 (-) True G95437
TU118967 lncRNA downstream 269551 1868219 ~ 1870885 (-) True G95400
TU118887 lncRNA downstream 342403 1797825 ~ 1798033 (-) True G95335
TU119103 lncRNA upstream 52104 2253437 ~ 2253730 (-) True G95508
TU119106 lncRNA upstream 61790 2263123 ~ 2263470 (-) True G95511
TU119143 lncRNA upstream 190236 2391569 ~ 2391872 (-) True G95544
TU119218 lncRNA upstream 431647 2632980 ~ 2633218 (-) True G95605
TU119226 lncRNA upstream 447126 2648459 ~ 2649573 (-) True G95612
AMCG00015097 mRNA downstream 29758 2103760 ~ 2110678 (-) True AMCG00015097
AMCG00015098 mRNA downstream 47209 2080771 ~ 2093227 (-) True AMCG00015098
AMCG00015094 mRNA downstream 65724 2066674 ~ 2074712 (-) True AMCG00015094
AMCG00015093 mRNA downstream 88669 2030299 ~ 2051767 (-) True AMCG00015093
AMCG00015091 mRNA downstream 166209 1963011 ~ 1974227 (-) True AMCG00015091
AMCG00015104 mRNA upstream 50257 2251590 ~ 2263117 (-) True AMCG00015104
AMCG00015110 mRNA upstream 191663 2392996 ~ 2393305 (-) True AMCG00015110
AMCG00015109 mRNA upstream 225613 2426946 ~ 2432937 (-) True AMCG00015109
AMCG00015106 mRNA upstream 236976 2438309 ~ 2438755 (-) True AMCG00015106
AMCG00015108 mRNA upstream 240223 2441556 ~ 2453425 (-) True AMCG00015108
TU119057 other downstream 2984 2136420 ~ 2137452 (-) True G95472
TU119027 other downstream 47198 2090529 ~ 2093238 (-) False AMCG00015098
TU119032 other downstream 63069 2074142 ~ 2077367 (-) False AMCG00015094
TU118971 other downstream 160560 1964833 ~ 1979876 (-) False AMCG00015091
TU118802 other downstream 623311 1510521 ~ 1517125 (-) True G95257
TU119135 other upstream 149327 2350660 ~ 2351050 (-) True G95536
TU119249 other upstream 464892 2666225 ~ 2670244 (-) False AMCG00015117
TU119334 other upstream 612314 2813647 ~ 2816067 (-) True G95700
TU119414 other upstream 686917 2888250 ~ 2891696 (-) False AMCG00015135
TU119447 other upstream 776864 2978197 ~ 2980408 (-) True G95791

Expression Profile