RNA id: AMCG00015113


Basic Information

Item Value
RNA id AMCG00015113
length 600
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00015113
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2487161 ~ 2489780 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGAGAGAGGTGAACGCTGCGGTTGACTTCCTGCTGCGCCTGGCTCGGGAGCGGGGGGGCGTGAATGAGGAGCGGGCCGGTCGCTTCGCAGAAAAGCTGCGGAACATCCTGCGAGAGAGATATGCCCACCACTGGTGTATCCGGGTGAACAGCACGTCTCCTTGTGATTGGGCGCTGGAGAGGGCATGTCGGGAGAGTGGAATGATGTCATCGGAGCTGAGGCTGCCCAGAGAGATCACTCTGTGGATTGACCCCTATGAGGTCTGCGCCCGCTCAGGGGAGGGCTGCCGCTTCTTCACAGTGGCACGCTTTGagggggaagaggagaaggagtCACAAGAGAGACACAGcgaagaagagggagaggtgTACGTGGAGGGAAAGGGAAAGactccaccccccacctccaaaGAAGCGACAAAGTTCAACGAAAGCATCTCAGACGACCTCTCCAGCAGCCCCTCTGACTGCAGCTCTGaccaagaggaggaggaagagaagaaggagaaggagaagaagtgTAGAGGGAGGAGGGAACACACGGGCATCACCATTATTCCCCGGGTTCGAAAGCCCCGCAGGACAGCCAGAACTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119143 lncRNA downstream 95289 2391569 ~ 2391872 (-) True G95544
TU119106 lncRNA downstream 223691 2263123 ~ 2263470 (-) True G95511
TU119103 lncRNA downstream 233431 2253437 ~ 2253730 (-) True G95508
TU119088 lncRNA downstream 285828 2140436 ~ 2201333 (-) False AMCG00015099
TU119054 lncRNA downstream 356916 2128811 ~ 2130245 (-) True G95469
TU119218 lncRNA upstream 143200 2632980 ~ 2633218 (-) True G95605
TU119226 lncRNA upstream 158679 2648459 ~ 2649573 (-) True G95612
TU119258 lncRNA upstream 186659 2676439 ~ 2676679 (-) True G95636
TU119259 lncRNA upstream 187144 2676924 ~ 2677129 (-) True G95637
TU119283 lncRNA upstream 207472 2697252 ~ 2697823 (-) True G95653
AMCG00015107 mRNA downstream 4557 2464034 ~ 2482604 (-) True AMCG00015107
AMCG00015108 mRNA downstream 33736 2441556 ~ 2453425 (-) True AMCG00015108
AMCG00015106 mRNA downstream 48406 2438309 ~ 2438755 (-) True AMCG00015106
AMCG00015109 mRNA downstream 54224 2426946 ~ 2432937 (-) True AMCG00015109
AMCG00015110 mRNA downstream 93856 2392996 ~ 2393305 (-) True AMCG00015110
AMCG00015114 mRNA upstream 38895 2528675 ~ 2532571 (-) True AMCG00015114
AMCG00015112 mRNA upstream 88294 2578074 ~ 2580981 (-) True AMCG00015112
AMCG00015118 mRNA upstream 138907 2628687 ~ 2637421 (-) True AMCG00015118
AMCG00015119 mRNA upstream 149459 2639239 ~ 2641249 (-) True AMCG00015119
AMCG00015116 mRNA upstream 153743 2643523 ~ 2660899 (-) True AMCG00015116
TU119135 other downstream 136111 2350660 ~ 2351050 (-) True G95536
TU119057 other downstream 349709 2136420 ~ 2137452 (-) True G95472
TU119027 other downstream 393923 2090529 ~ 2093238 (-) False AMCG00015098
TU119032 other downstream 409794 2074142 ~ 2077367 (-) False AMCG00015094
TU118971 other downstream 507285 1964833 ~ 1979876 (-) False AMCG00015091
TU119249 other upstream 176445 2666225 ~ 2670244 (-) False AMCG00015117
TU119334 other upstream 323867 2813647 ~ 2816067 (-) True G95700
TU119414 other upstream 398470 2888250 ~ 2891696 (-) False AMCG00015135
TU119447 other upstream 488417 2978197 ~ 2980408 (-) True G95791
TU119524 other upstream 696389 3186169 ~ 3189093 (-) True G95850

Expression Profile