RNA id: AMCG00015152


Basic Information

Item Value
RNA id AMCG00015152
length 3188
RNA type mRNA
GC content 0.55
exon number 9
gene id AMCG00015152
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3250981 ~ 3268761 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tatatattttttattttatttttggcaactGGATGCATAAGCAGTACTTTCGCTTTTTACCTGCAATCAGAATGATCTAGTTTGTTTGCAAGacagacttaaaaaaaatattattgatttaatgttattaatgaattaatgtttaatatataattgagTTGAGCTTCTGTAGTTGCTGGTGCCAGGGGAGTGTAACGTTAGTGCgaatagagagagggagaaaaggtgtgaagagagagagggggagaaaataGTTCAACCACCGGCGCAAACTTTTGATTGGGAAAACtcaacagtattttttttttatgattgcaATCAGAATCATTCTAGTTatttttctgtagttttgtcAAATGATTGTCTACTTTGGCGGAAGGTCGGTGCTATGATTGTGACGAAGGCCCCCGCTGTTCGGGCAGTGTGGCACAAGTTTCTGACGCAGTTGGTCTCAGGCGGTTCTTTCCCAGGACGGGGCGAGTCGCTTGTGGGTCCCAGTAGTCGGCGACCATAGACCCCTTGCCGAGCGTGATGGGGCCCTTGGATCTCTCTCGGAGTACAGGTCGGAACCGTGCATCGGATTGCAACGGCCACTCTGAAGACCCTGCTGCCACCGCTGGAGCTCCTGTATCTGCAAGGGACCCCGGGGACCGACGGGCCCCTCAGCGTCTGCCGGCCGTGGAAGCTCAGTACTCAGTACCTTGTGGGGACCTCCCCCGTGCTGCTCCGGCACATCGTGGGCATTTGGTCTCAGGTGCCTCAGCCAACTCGTGTGAAAGGGACACCAGTCATTTTGAAAAGTTACACTGGACGACTGTCTCACAAAACGGGGAAGGCCGGGGGAAAGGTGCCGTCAGCCCTgagtctctctcttttcccgCTGCCAAAGTGGAACGGATTCCGAAGACCCCATCACCCGCCTCCACCTCTCCCAAATGCGAGGTGGACACCCCCCCCAACTCCCGTACCCCGACGCCCGACTCAAAAGCGACTGGAAAAAACGCTTCCAGACTGCCGTTCCGAAAGCGGCCGTTCCCTAACGAAGAGGCCCCTCCATCTCGGGAGAAGCCCCGGTCTCTCCTACAATTCTCCCCTGCCGAAGGGGCGACTGAGGCGGCAAGGAGGGAGAGCCAGCCCACCGCGAAGGTGCGAAGGAGGGAAGACGGAGAGAGAAGCAGTTACCCGCCAGAAGGGGCAAATCATGAGCATTTAACGACCGCCATTGCCCTCAGCGACAGATACCATTTCTACCCCATTCCGCCACAATACATGGCTCCCCAGTACCACTACCCCATCTACATCCCCAATCTCATCCTGCATGCCCCACCCATGTCCCCAGTCTACCCAATGGAGGAGGACAAGCTGGTGGCTGACATCACCATAGCAACGCAGCAGGACGATGATGGAGACACggctCTCCATATAGCTGTGGTTCAGGGAAAGATGGATCTGGTTCAGAGACTGATCTACATCCTGCAGAAGAGCAACAGAGACCTGGACACCTACAACAATCTGCGGCAGACTCCCCTGCACTTGGCAGTGATTACCCACAATGCCCCTCTGGTGGGCGCCCTCCTGAGTGGGGGTGCAGACGTGGGGGCACTGGACCGGAATGGCCAGACAGCGGCTCACCTGTGCTGTGAACACGCTGACACGGCCTGCCTGCGCACCCTGCTCATGCACACGCCTCGCACCTTGGACCTGGAGACGCGCAACTATGAGggcctCACTCCTCTCCATGTTGCAGTGCAGTCTGGGAGCTGTGAGCTGGTCAAGCTGCTGTTGGACAGTGGGGCGGACATCGACGCTGtgGATATTAAGAGTGGTCGCAGTCCTCTCATTCATGCGGTGGACATTAACAATGTGGAGATGGTCAGCTTCCTGATTGAGggAGGGGCCAGTGTGAACGCACAGTCGTACTCTGGCAACAGCGCCCTGCACAGCGCTTGTGGGCGGGGCCAGCTGGACACGGTGCGGCTACTGCTCAAGAACGGGGCGGACAGCGGCCTGAAGAACTACCACAACGACACGGCACTGAGCATCGCCAAGGACAGGAGGgtcACTGATGTGTTGAGGGGTAAAGGAACGCGTAGTCTGAACTCCAAACCCATTGAGCCCCACCCTGGCACCCCCTCGCCACACAGCCACTCGCCATCGTCTCACCAACACAATGCCAATGgaaCTCCAGCTCACTCTCCAGGCCTCGCCCCCCGCCAATCTCCATTGGCCCCTTCCCCTGCTCCCTCCAGTCCCGCCCCCGCTCAGCCCCAGAAGCAGGCCTCCCTGGCCCCACCCCAAGAACCCAGTTCCGACCAAACACCAGAAGAGGCAGGGCTTCCCCGGGCGACGCAGGACAGGAACCAACCGGGAGAGGGTATGGCCCGGCGAGTCCCACCCATCGAGGTCATTGGCTGCCTGCCTCCCGAGCACCGGCTGCAGTTCCAGCTGATTCCAGTGGGAGTCAGGGCTCTCCCCCATCAGCTGCCTTCACTCGTCCCCTTCCCTGTCGACATGCAAAATGGCTATTACCTGGAACAGCTATACCCCCATCCCTTCCACTCTCTCCACCCCCTGCCTCACCCTGCTCTGCCCTTCCACccttcctcctgctcctcctcactctctgtctcctcctctccGCCCTCCTCTTCTTCGTGCTCCCCGGCCAATCACAGCCTGCCTCCCCACGTCCCCCAGTCACGACCCTCCAGCCGGGGGAGCAACCACCAATGGGACGGCTCCCCCGAGGTCAGAGGTGAAAGTTGACAGGGGTGTTGACCCCACACctacacccacacccacacccataCCCGCACAGGCGTACTCACACTGTCTCAGCCCCCACACCCACTCACAACCACACCCACACGAAGGTAAAAATTATTAAAGCTTTAAATGCCGGTGGGGACAACAGAAAGGTATGCCAAGAGTAGCTCTATTCATGATAAAAAACTATAGTATATGCAGTACAATGCAGTACAGAATGGTATAGTGTGTAGCATAGTGGAGAATATTATGGATGTCGACTATAGTAGACTAGAGTGCAGAACTGTGTATTAAATGacactgtttaatttgtctATCATATGAGGGTGTTCGGATATTCATAATGATATTTTCCAGTGTTAATTCTGTCtaacatttgtaatgtttttttattttttatattattgtttgttttcttgaag

Function

GO: NA

KEGG:

id description
K09258 BCL3; B-cell CLL/lymphoma protein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119476 lncRNA downstream 123389 3125431 ~ 3127592 (-) True G95814
TU119456 lncRNA downstream 256826 2993674 ~ 2994155 (-) True G95798
TU119442 lncRNA downstream 287636 2960335 ~ 2963345 (-) True G95786
TU119434 lncRNA downstream 305129 2943087 ~ 2945852 (-) True G95778
TU119436 lncRNA downstream 311886 2936294 ~ 2939095 (-) True G95780
TU119642 lncRNA upstream 203446 3472207 ~ 3472926 (-) True G95933
TU119672 lncRNA upstream 333843 3602604 ~ 3603677 (-) True G95960
TU119668 lncRNA upstream 349012 3617773 ~ 3618298 (-) True G95957
TU119680 lncRNA upstream 461238 3729999 ~ 3730319 (-) True G95968
TU119690 lncRNA upstream 602315 3871076 ~ 3871334 (-) True G95978
AMCG00015153 mRNA downstream 3393 3242110 ~ 3247588 (-) True AMCG00015153
AMCG00015154 mRNA downstream 11456 3235505 ~ 3239525 (-) True AMCG00015154
AMCG00015144 mRNA downstream 242370 3000816 ~ 3008611 (-) True AMCG00015144
AMCG00015136 mRNA downstream 322704 2925485 ~ 2928277 (-) True AMCG00015136
AMCG00015139 mRNA downstream 328469 2915988 ~ 2922512 (-) True AMCG00015139
AMCG00015158 mRNA upstream 34996 3303757 ~ 3313326 (-) True AMCG00015158
AMCG00015157 mRNA upstream 75613 3344374 ~ 3347587 (-) True AMCG00015157
AMCG00015156 mRNA upstream 82857 3351618 ~ 3358905 (-) True AMCG00015156
AMCG00015160 mRNA upstream 126126 3394887 ~ 3398152 (-) True AMCG00015160
AMCG00015159 mRNA upstream 134713 3403474 ~ 3407541 (-) True AMCG00015159
TU119528 other downstream 53792 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 61888 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 270573 2978197 ~ 2980408 (-) True G95791
TU119414 other downstream 359285 2888250 ~ 2891696 (-) False AMCG00015135
TU119334 other downstream 434914 2813647 ~ 2816067 (-) True G95700
TU119619 other upstream 81118 3349879 ~ 3350442 (-) True G95921
TU119671 other upstream 335842 3604603 ~ 3607192 (-) False AMCG00015164
TU119841 other upstream 906118 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 1348950 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 1509632 4778393 ~ 4802904 (-) True AMCG00015203

Expression Profile