RNA id: AMCG00015182


Basic Information

Item Value
RNA id AMCG00015182
length 581
RNA type mRNA
GC content 0.59
exon number 6
gene id AMCG00015182
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4025654 ~ 4027415 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGCTGATCACCAGTGTCACAGTGCTCCCTGCTGGAGGGGAGATGACAGTGGTGGGTGGGAACCTGACTCTGCAGTGCCAGGCTGACGCCCCTGTGGAATCCAGACAGTGGAGCAGATCCATGCCTCCCGCTACCTTCACCTGGACCCTCAGCGGGACAATTGTCTCCACCAGCACCCAGTACACAATTCACAGCGCCTCCTCTGCTGACCAGGGGAATTACACCTGCATGGGTCACAACCAAAACACGAACAGTACTGTGTCTGTAGTGCATGAGCTGAGTGTGataggggAGGCTCCTGCAACCCCCTATGGGTCTCTGAGTGGGGGAGTGATTGCTGGCATCGTGATTGGCCTGGTGAGCATGGCACTCATGGGAGGGGCAGTGTGCTTCCTACtgaggagagagggGAGTGTCAGGAGCCCCCCCAATGAGACAGGAGAGAAGAaCTCTCAGTCGGCCATGTATGAGAACTCCAGAGCCCTGAGTGCAGCGCTGACCTACGAGAACCTGCCGGCTCCTCACACGGGCCCTGGAaAGGCAGCAGTCCAGTCCCGTCCTGAAGAGGCAGACACCACATAC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119745 lncRNA downstream 54898 3969818 ~ 3970756 (-) True G96018
TU119690 lncRNA downstream 154320 3871076 ~ 3871334 (-) True G95978
TU119680 lncRNA downstream 295335 3729999 ~ 3730319 (-) True G95968
TU119668 lncRNA downstream 407356 3617773 ~ 3618298 (-) True G95957
TU119672 lncRNA downstream 421977 3602604 ~ 3603677 (-) True G95960
TU119835 lncRNA upstream 84841 4112256 ~ 4123963 (-) True AMCG00015180
TU119860 lncRNA upstream 188312 4215727 ~ 4216894 (-) True G96110
TU119865 lncRNA upstream 224467 4251882 ~ 4255484 (-) True G96115
TU119876 lncRNA upstream 274217 4301632 ~ 4301940 (-) True G96125
TU119878 lncRNA upstream 287278 4314693 ~ 4314916 (-) True G96127
AMCG00015174 mRNA downstream 56674 3950144 ~ 3968980 (-) True AMCG00015174
AMCG00015175 mRNA downstream 121122 3902828 ~ 3904532 (-) True AMCG00015175
AMCG00015169 mRNA downstream 200617 3815946 ~ 3825037 (-) True AMCG00015169
AMCG00015164 mRNA downstream 418557 3603683 ~ 3607097 (-) True AMCG00015164
AMCG00015163 mRNA downstream 560843 3416852 ~ 3464811 (-) True AMCG00015163
AMCG00015178 mRNA upstream 10003 4037418 ~ 4039216 (-) True AMCG00015178
AMCG00015180 mRNA upstream 82904 4110319 ~ 4112706 (-) False AMCG00015180
AMCG00015181 mRNA upstream 103987 4131402 ~ 4163989 (-) True AMCG00015181
AMCG00015179 mRNA upstream 139946 4167361 ~ 4169016 (-) True AMCG00015179
AMCG00015177 mRNA upstream 154537 4181952 ~ 4184519 (-) True AMCG00015177
TU119671 other downstream 418462 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 675212 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 828465 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 836561 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 1045246 2978197 ~ 2980408 (-) True G95791
TU119841 other upstream 147464 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 590296 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 750978 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 940635 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 958157 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile