RNA id: AMCG00015222



Basic Information


Item Value
RNA id AMCG00015222
length 630
RNA type mRNA
GC content 0.46
exon number 2
gene id AMCG00015222
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5445984 ~ 5446945 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gTGCTGGGTGGTACTCTGGTGGTGACGTATCCAGTGTCACAGATCTGTGCCCTGAGGGGCTCCTCTGTGCTCATACCCTGTACCTACGATTATCCTGAAGGAGCCACAGTGACAGAGTGGAAGTGGACGAATTTACCAAATAATAGTAACTATGATCAACCCCCCTTTATTTATCACAGTAGAGGGGAACATCTTGACACTAACTACACAGGCAGAGTGCAGTATACTGAACAAGACAGGAGCTGCAGCTTCAAGTTGACAGGTATAAGGAGCTCTGACAGCAGGaaatattatttcagaataacaATAGACAGACACCCAAAATCAGTCCTGGGTCTGAATGGAGTGAATCTCAGTGTTGCAGATGGTCCCTTGACAGttaaagtgaaaacaacaagACACAGCCCAGTCATTCTAGAAGGAGACAATGTGACCCTGACCTGCAGCACACAGAGCTGCTCTCCAAACCAGACAGAGTTCACCTGGTTTAAGGATGGCCGGCCCACCTACAACACCACATCAAACACACTGAGCTTTAATAATGTTTCCTATGAACACTTTGGAAACTACTCCTGTGCTTCAAAAGACAATACAAGTGTGCAGTCTCCACAGATCACTTTGAAGGTTGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU120178 lncRNA upstream 251805 5193972 ~ 5194179 (+) True G96384
TU120152 lncRNA upstream 341403 5101088 ~ 5104581 (+) False AMCG00015215
TU120129 lncRNA upstream 368081 5076033 ~ 5077903 (+) False AMCG00015212
TU120111 lncRNA upstream 409713 5036038 ~ 5036271 (+) True G96326
TU119969 lncRNA upstream 775809 4669472 ~ 4670175 (+) True G96205
TU120226 lncRNA downstream 10888 5457833 ~ 5459048 (+) True G96424
TU120329 lncRNA downstream 305223 5752168 ~ 5753255 (+) True G96512
TU120332 lncRNA downstream 308138 5755083 ~ 5755350 (+) True G96513
TU120367 lncRNA downstream 418099 5865044 ~ 5919123 (+) True G96543
TU120401 lncRNA downstream 578400 6025345 ~ 6067602 (+) True G96568
AMCG00015226 mRNA upstream 11468 5426904 ~ 5434516 (+) True AMCG00015226
AMCG00015223 mRNA upstream 47605 5394380 ~ 5398379 (+) True AMCG00015223
AMCG00015221 mRNA upstream 94049 5319558 ~ 5351935 (+) True AMCG00015221
AMCG00015214 mRNA upstream 309148 5129341 ~ 5136836 (+) True AMCG00015214
AMCG00015215 mRNA upstream 326583 5084574 ~ 5119401 (+) True AMCG00015215
AMCG00015224 mRNA downstream 15807 5462752 ~ 5470874 (+) True AMCG00015224
AMCG00015225 mRNA downstream 24637 5471582 ~ 5476576 (+) True AMCG00015225
AMCG00015237 mRNA downstream 55520 5502465 ~ 5509697 (+) True AMCG00015237
AMCG00015241 mRNA downstream 102250 5549195 ~ 5559773 (+) True AMCG00015241
AMCG00015236 mRNA downstream 113133 5560078 ~ 5570355 (+) True AMCG00015236
TU120218 other upstream 11962 5432605 ~ 5434022 (+) True G96420
TU120210 other upstream 54261 5388937 ~ 5391723 (+) True G96415
TU120099 other upstream 423932 5021366 ~ 5022052 (+) True G96317
TU120035 other upstream 566088 4876121 ~ 4879896 (+) True G96264
TU119757 other upstream 1345844 4089201 ~ 4100140 (+) True G96030
TU120766 other downstream 1550688 6997633 ~ 6999583 (+) False AMCG00015293
TU120767 other downstream 1550688 6997633 ~ 7080788 (+) True AMCG00015293
TU120961 other downstream 1968424 7415369 ~ 7415762 (+) True G97006
TU121162 other downstream 2503865 7950810 ~ 7956094 (+) False AMCG00015324
TU121271 other downstream 2627236 8074181 ~ 8078761 (+) True AMCG00015334

Expression Profile