RNA id: AMCG00015264


Basic Information

Item Value
RNA id AMCG00015264
length 350
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00015264
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6249162 ~ 6257319 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGGGGAACACCACAGAGATGAACATGAAGTCATGCATTGAACCCAAAGTCTGTGGAGACGACATCTCAATCAACTTTGGAGCGCATGGAGGGATAACTTTCAGTATAAAATGCTGCAGCACAGACTTGTGCAAAACAACCTATCCCCCTGTTACTATTGGTGGCCGATACATTGCCATGAAGGGATGTGCCACCAGCAACATCTGCAGCCGCCAGTCAACAAAAAAGTTTCTCAACCACTTCGGTGTAGGATTCAGCTGCTGTGACGGAAACCTGTGCAACAACACCAAGCATGCTGGACAGAGTCTCTTCCTCCTTCTGGCATGTCTTGCCCCCATCGCCCTCTTCCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU120426 lncRNA upstream 131002 6117615 ~ 6118160 (+) True G96591
TU120401 lncRNA upstream 181560 6025345 ~ 6067602 (+) True G96568
TU120405 lncRNA upstream 184388 6051398 ~ 6064774 (+) True G96572
TU120367 lncRNA upstream 330039 5865044 ~ 5919123 (+) True G96543
TU120332 lncRNA upstream 493812 5755083 ~ 5755350 (+) True G96513
TU120528 lncRNA downstream 14018 6271337 ~ 6273388 (+) True G96668
TU120531 lncRNA downstream 18049 6275368 ~ 6275601 (+) True G96671
TU120568 lncRNA downstream 121452 6378771 ~ 6385567 (+) True G96697
TU120586 lncRNA downstream 172270 6429589 ~ 6431235 (+) True G96710
TU120595 lncRNA downstream 198513 6455832 ~ 6490523 (+) False G96716
AMCG00015262 mRNA upstream 91852 6144811 ~ 6157310 (+) True AMCG00015262
AMCG00015254 mRNA upstream 202486 6039508 ~ 6046676 (+) True AMCG00015254
AMCG00015253 mRNA upstream 213671 6027825 ~ 6035491 (+) True AMCG00015253
AMCG00015255 mRNA upstream 230920 6005307 ~ 6018242 (+) True AMCG00015255
AMCG00015252 mRNA upstream 277047 5959682 ~ 5972115 (+) True AMCG00015252
AMCG00015265 mRNA downstream 30266 6287585 ~ 6297209 (+) True AMCG00015265
AMCG00015263 mRNA downstream 45964 6303283 ~ 6309661 (+) True AMCG00015263
AMCG00015268 mRNA downstream 53647 6310966 ~ 6312632 (+) True AMCG00015268
AMCG00015266 mRNA downstream 86478 6343797 ~ 6344918 (+) True AMCG00015266
AMCG00015269 mRNA downstream 128347 6385666 ~ 6389631 (+) True AMCG00015269
TU120220 other upstream 785045 5426879 ~ 5464117 (+) False G96420
TU120218 other upstream 815140 5432605 ~ 5434022 (+) True G96420
TU120210 other upstream 857439 5388937 ~ 5391723 (+) True G96415
TU120099 other upstream 1227110 5021366 ~ 5022052 (+) True G96317
TU120035 other upstream 1369266 4876121 ~ 4879896 (+) True G96264
TU120766 other downstream 740314 6997633 ~ 6999583 (+) False AMCG00015293
TU120767 other downstream 740314 6997633 ~ 7080788 (+) True AMCG00015293
TU120961 other downstream 1158050 7415369 ~ 7415762 (+) True G97006
TU121162 other downstream 1693491 7950810 ~ 7956094 (+) False AMCG00015324
TU121271 other downstream 1816862 8074181 ~ 8078761 (+) True AMCG00015334

Expression Profile