RNA id: AMCG00015265



Basic Information


Item Value
RNA id AMCG00015265
length 330
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00015265
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6287585 ~ 6297209 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAGTCATGTGCAGAACCCACAGGCTGTGGAGAACCAATCTCGATCAACTTTGGAGTGCTTGGGAGGACGACTGTCAACTCAAAGTGCTGCAGCACAGAATTGTGCAACACGCAGAATGTTCCCGTTACTGCTGGTGACCAAACCATAGTCATAAAAGGATGTGCCACCAGCAACGTCTGCGATCTCAAGCCACCAAAGGAAATTCTCAACACCATCGGTATGGAATTAAACTGCTTTGAGAGAAACCTGTGCAACAACGCCAAGCGTGCGGTACAGAATCTCTTCCTTCTGCTGGCGTCTCTCATCCCCATCGCCCACTTCCTCTGA

Function


GO: NA

KEGG:

id description

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU120531 lncRNA upstream 11984 6275368 ~ 6275601 (+) True G96671
TU120528 lncRNA upstream 14197 6271337 ~ 6273388 (+) True G96668
TU120426 lncRNA upstream 169425 6117615 ~ 6118160 (+) True G96591
TU120401 lncRNA upstream 219983 6025345 ~ 6067602 (+) True G96568
TU120405 lncRNA upstream 222811 6051398 ~ 6064774 (+) True G96572
TU120568 lncRNA downstream 81562 6378771 ~ 6385567 (+) True G96697
TU120586 lncRNA downstream 132380 6429589 ~ 6431235 (+) True G96710
TU120595 lncRNA downstream 158623 6455832 ~ 6490523 (+) False G96716
TU120593 lncRNA downstream 191059 6488268 ~ 6490523 (+) True G96716
TU120620 lncRNA downstream 392980 6690189 ~ 6691799 (+) True AMCG00015277
AMCG00015264 mRNA upstream 30266 6249162 ~ 6257319 (+) True AMCG00015264
AMCG00015262 mRNA upstream 130275 6144811 ~ 6157310 (+) True AMCG00015262
AMCG00015254 mRNA upstream 240909 6039508 ~ 6046676 (+) True AMCG00015254
AMCG00015253 mRNA upstream 252094 6027825 ~ 6035491 (+) True AMCG00015253
AMCG00015255 mRNA upstream 269343 6005307 ~ 6018242 (+) True AMCG00015255
AMCG00015263 mRNA downstream 6074 6303283 ~ 6309661 (+) True AMCG00015263
AMCG00015268 mRNA downstream 13757 6310966 ~ 6312632 (+) True AMCG00015268
AMCG00015266 mRNA downstream 46588 6343797 ~ 6344918 (+) True AMCG00015266
AMCG00015269 mRNA downstream 88457 6385666 ~ 6389631 (+) True AMCG00015269
AMCG00015277 mRNA downstream 389142 6686351 ~ 6691259 (+) False AMCG00015277
TU120220 other upstream 823468 5426879 ~ 5464117 (+) False G96420
TU120218 other upstream 853563 5432605 ~ 5434022 (+) True G96420
TU120210 other upstream 895862 5388937 ~ 5391723 (+) True G96415
TU120099 other upstream 1265533 5021366 ~ 5022052 (+) True G96317
TU120035 other upstream 1407689 4876121 ~ 4879896 (+) True G96264
TU120766 other downstream 700424 6997633 ~ 6999583 (+) False AMCG00015293
TU120767 other downstream 700424 6997633 ~ 7080788 (+) True AMCG00015293
TU120961 other downstream 1118160 7415369 ~ 7415762 (+) True G97006
TU121162 other downstream 1653601 7950810 ~ 7956094 (+) False AMCG00015324
TU121271 other downstream 1776972 8074181 ~ 8078761 (+) True AMCG00015334

Expression Profile