RNA id: AMCG00015282


Basic Information

Item Value
RNA id AMCG00015282
length 1374
RNA type mRNA
GC content 0.52
exon number 8
gene id AMCG00015282
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6835203 ~ 6854561 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGCTCCCTCTTAAAGTTCCACCAGTCCGACTCATCTGGACCCCGGGGCTTCCGGGCTTCTCTCTCCGGTGCCCCAGCCGCTTGTCTTGGGGGCTCGTCATGGCCATCCCGCAGCTTCTGGGCCTTTCTCCCCAATATGGAAGCTGCCTGTCTCGGGGGCTCGTCACCGCCACTCCGCGCTCCGGTGTGTCTGATCAAGAACGGCGAGGACGGGAAGCTGCAGGTCGTTCCTGAGGCACTGGGCATCCTGAAGCTGATCGAGCAGCCGGTAGTGGCTGTGGCGGTGGTTGGGCTGTACCGCACTGGCAAATCTTACCTCATGAACAGGCTGGCGGGGAAGAGACAGGGATTCTCCCTGGGCTCCACCATCCAGTCCCACACCAAGGGCATCTGGATGTGGTGTGTCCCTCATCCCACTAAACCTGACCTGACCCTGGTGCTGCTGGACACTGAGGGCCTGGGGGACGTGGAGAAGTCAGATTCAAATGAAGAGAATCAATCATCTGAATTGGCTTATTACTTTCCCTCTTTTGTGTGGACAGTGCGAGATTTCTCTTTGGAGCTGGAGATAGATGACAAGCCCATTACAGCAGATCAATACCTTGAAAACTCTCTCATGCTAAAAGAAGGTATCTCAACAAACCTCCAGAAGTACAACTTACCTCGAGAGTGCATCAAAGAGTACTTCCGTATCCGCAAGTGCTTTGTGTTTGACCGCCCAGCCCATcccaagaaaatgaaaagaatgcATGAGCTGACTGATGAAGATCTGGATCCTTGCTTTGTGCAGAGCGCCAAGGAGTTCTGCAATTACATCTTTGAAAAGGCTGAGATCAAAACCATGAAGGGGGTCTTGGGGAGTCTGGCGGAGATGTACATGCAGGCAATCTGCAGCGGGAATATTCCCTGTCTGGACAACGCAGTGCTGGCACTGGCACAGATAGAGAACGCCGCGGCCCAAGACAGAGCCCAGCAGCACTACAGGGAGAAAATCAGTGCAGTTTCCCTCCCCACTGAGTCTCTACAGGAGCTCTCTGATCTGAACCAGCGGTTCCTTCAAGAGGCTCTGGAGATGTTCATGAAGAGCTCCTTCAGAGATGAGGAACAGAAGAGAATCATCAGCAACTTGTTCAGGCCAGTAGAGGAGAGAATAGAAGAGGAGTCCTACATGGTGTCTGGGGGGTATGAGCAGTACAAACAGGACCTGCAGCACTTTGAGAAGGAATACAAAGCAGCACCTGGCAAAGGTGTTCAAGCTGATGAGGTTCTGAAAGAATTCCTCttagagaaagaaaacattggCAAAGTGATACTGACTGCAGACAAATCCATCACTGATGCTCAGAAGAAAATGGaaggtaaaatattttaa

Function

GO: NA

KEGG:

id description
K20899 GBP1_3_4_7; guanylate-binding protein 1/3/4/7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU120631 lncRNA downstream 422494 6410647 ~ 6412709 (-) True AMCG00015271
TU120566 lncRNA downstream 472794 6355020 ~ 6362409 (-) True G96696
TU120513 lncRNA downstream 606427 6228514 ~ 6228776 (-) True G96653
TU120510 lncRNA downstream 611574 6157103 ~ 6223629 (-) True G96650
TU120497 lncRNA downstream 714201 6120654 ~ 6121002 (-) True G96643
TU120734 lncRNA upstream 15901 6870462 ~ 6871498 (-) True AMCG00015283
TU120743 lncRNA upstream 36674 6891235 ~ 6892166 (-) True AMCG00015285
TU120746 lncRNA upstream 40519 6895080 ~ 6896427 (-) False AMCG00015285
TU120800 lncRNA upstream 132839 6987400 ~ 7063937 (-) True G96873
TU120912 lncRNA upstream 418350 7272911 ~ 7277373 (-) True G96967
AMCG00015279 mRNA downstream 69949 6731492 ~ 6765254 (-) True AMCG00015279
AMCG00015278 mRNA downstream 143822 6672892 ~ 6691381 (-) True AMCG00015278
AMCG00015274 mRNA downstream 225776 6608049 ~ 6609427 (-) True AMCG00015274
AMCG00015275 mRNA downstream 244203 6590193 ~ 6591000 (-) True AMCG00015275
AMCG00015273 mRNA downstream 309396 6515366 ~ 6525807 (-) True AMCG00015273
AMCG00015283 mRNA upstream 16182 6870743 ~ 6877734 (-) False AMCG00015283
AMCG00015287 mRNA upstream 29483 6884044 ~ 6885454 (-) True AMCG00015287
AMCG00015285 mRNA upstream 36869 6891430 ~ 6895164 (-) False AMCG00015285
AMCG00015288 mRNA upstream 63118 6917679 ~ 6923714 (-) True AMCG00015288
AMCG00015286 mRNA upstream 98758 6953319 ~ 6968744 (-) True AMCG00015286
TU120659 other downstream 134846 6698857 ~ 6700357 (-) True G96766
TU120625 other downstream 450583 6377890 ~ 6384620 (-) True AMCG00015267
TU120487 other downstream 771044 6049477 ~ 6064159 (-) False AMCG00015256
TU120336 other downstream 1078094 5755654 ~ 5757109 (-) False AMCG00015244
TU120133 other downstream 1761397 5054901 ~ 5073806 (-) False AMCG00015211
TU120782 other upstream 63205 6917766 ~ 6921641 (-) False AMCG00015288
TU121101 other upstream 931526 7786087 ~ 7786442 (-) True G97125
TU121448 other upstream 1276746 8131307 ~ 8134115 (-) False G97411
TU121510 other upstream 1555426 8409987 ~ 8411882 (-) True G97455
TU121587 other upstream 1686627 8541188 ~ 8543180 (-) False AMCG00015374

Expression Profile