RNA id: AMCG00015300


Basic Information

Item Value
RNA id AMCG00015300
length 495
RNA type mRNA
GC content 0.58
exon number 1
gene id AMCG00015300
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7231442 ~ 7231936 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCGGATGGCCGCTGTATCAGCTGTGGTTTTCCTACACCTCCCTGGACCACCTTCTCTCTGCCCTGTGGTGCAGTGCCTTTCCTGGGCAGAAAGTGCCGCCCAGTATCGACCTGGCGCCTTCCTATTGCCAGCTCTCCGAGGGCCATGGTTTCTCCCACACGCCAGCGCTCTACTGTAATTTCTTCGACCCTGTGACCAGCCAGCTGCCCCCCGCCTCCCCCAGGGGCCAACCGGAGCTCTGCAGCCTCCTGTTGAGCCGTTTCGCATCTTGGGCTGACGAGGAGCCAGAGAGCGGCGACCACCAGAAAGCCCACCATTGGACACCACCTTATAACCCCGCCACCCCAATTCAAAACCGGATCCCTGGGCCCTGCCTCTCCCGCCTGTCGCACTATGGAGGTGGGACAGAAAATGCAAAGGCTATTTCTACAGATGACTTCCTGTTTCAGATGTATGGCTATGACAACCAGCCagcacacacatttcaataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU120800 lncRNA downstream 167505 6987400 ~ 7063937 (-) True G96873
TU120746 lncRNA downstream 335015 6895080 ~ 6896427 (-) False AMCG00015285
TU120743 lncRNA downstream 339276 6891235 ~ 6892166 (-) True AMCG00015285
TU120734 lncRNA downstream 359944 6870462 ~ 6871498 (-) True AMCG00015283
TU120631 lncRNA downstream 818733 6410647 ~ 6412709 (-) True AMCG00015271
TU120912 lncRNA upstream 40975 7272911 ~ 7277373 (-) True G96967
TU120933 lncRNA upstream 104079 7336015 ~ 7337227 (-) True G96984
TU120938 lncRNA upstream 118573 7350509 ~ 7350785 (-) True G96988
TU120947 lncRNA upstream 130449 7362385 ~ 7364999 (-) True G96994
TU120944 lncRNA upstream 130554 7362490 ~ 7364999 (-) False G96994
AMCG00015299 mRNA downstream 7497 7217276 ~ 7223945 (-) True AMCG00015299
AMCG00015301 mRNA downstream 18065 7127305 ~ 7213377 (-) True AMCG00015301
AMCG00015296 mRNA downstream 131434 7085696 ~ 7100008 (-) True AMCG00015296
AMCG00015294 mRNA downstream 188450 7037847 ~ 7042992 (-) True AMCG00015294
AMCG00015295 mRNA downstream 201249 7016116 ~ 7030193 (-) True AMCG00015295
AMCG00015303 mRNA upstream 62926 7294862 ~ 7297585 (-) True AMCG00015303
AMCG00015304 mRNA upstream 154923 7386859 ~ 7389560 (-) True AMCG00015304
AMCG00015305 mRNA upstream 158953 7390889 ~ 7448294 (-) True AMCG00015305
AMCG00015313 mRNA upstream 475974 7707910 ~ 7710268 (-) True AMCG00015313
AMCG00015314 mRNA upstream 516406 7748342 ~ 7757219 (-) True AMCG00015314
TU120782 other downstream 309801 6917766 ~ 6921641 (-) False AMCG00015288
TU120659 other downstream 531085 6698857 ~ 6700357 (-) True G96766
TU120625 other downstream 846822 6377890 ~ 6384620 (-) True AMCG00015267
TU120487 other downstream 1167283 6049477 ~ 6064159 (-) False AMCG00015256
TU120336 other downstream 1474333 5755654 ~ 5757109 (-) False AMCG00015244
TU121101 other upstream 554151 7786087 ~ 7786442 (-) True G97125
TU121448 other upstream 899371 8131307 ~ 8134115 (-) False G97411
TU121510 other upstream 1178051 8409987 ~ 8411882 (-) True G97455
TU121587 other upstream 1309252 8541188 ~ 8543180 (-) False AMCG00015374
TU121599 other upstream 1348363 8580299 ~ 8581101 (-) False AMCG00015372

Expression Profile