RNA id: AMCG00015320


Basic Information

Item Value
RNA id AMCG00015320
length 312
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00015320
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7821194 ~ 7825760 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCGAAGCAATCCAGAAAAAACTACAAGCGGAGCTCGAAAAATATCAGCAGCTACAAAAAGACCTGAGCAAGAGCATGTCGGCGCGACAGAAGCTGGAGGCGCAGCTGACCGAGAACAACATCGTGAAAGAGGAGTTGGGCCTGCTGGAAGCCCAGAACACCGTCTATAAACTGATCGGACCAGTGCTAGTGAAGCAAGATCTGGATGAAGCAAAAGCCACTGTAGGGAAAAGGCTGGAGTACATCACTGGAGAgatCCTGCAGCAGGAGTACCAGCGGGCCCAGGGCCGCGCCCCCGTCAAAGTGTGA

Function

GO: NA

KEGG:

id description
K04798 pfdB, PFDN6; prefoldin beta subunit

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121110 lncRNA downstream 1005 7819804 ~ 7820189 (-) True G97134
TU121106 lncRNA downstream 5792 7814894 ~ 7815402 (-) True G97130
TU121097 lncRNA downstream 40596 7780392 ~ 7780598 (-) True G97121
TU121011 lncRNA downstream 201677 7497942 ~ 7619517 (-) True G97041
TU120982 lncRNA downstream 412678 7408002 ~ 7408516 (-) False AMCG00015305
TU121210 lncRNA upstream 143837 7969597 ~ 7970757 (-) True G97221
TU121240 lncRNA upstream 175726 8001486 ~ 8016073 (-) True G97244
TU121429 lncRNA upstream 243020 8068780 ~ 8069037 (-) True G97395
TU121430 lncRNA upstream 244275 8070035 ~ 8091826 (-) True AMCG00015333
TU121431 lncRNA upstream 244275 8070035 ~ 8084294 (-) False AMCG00015333
AMCG00015314 mRNA downstream 63975 7748342 ~ 7757219 (-) True AMCG00015314
AMCG00015313 mRNA downstream 110926 7707910 ~ 7710268 (-) True AMCG00015313
AMCG00015305 mRNA downstream 372900 7390889 ~ 7448294 (-) True AMCG00015305
AMCG00015304 mRNA downstream 431634 7386859 ~ 7389560 (-) True AMCG00015304
AMCG00015303 mRNA downstream 523609 7294862 ~ 7297585 (-) True AMCG00015303
AMCG00015321 mRNA upstream 921 7826681 ~ 7828114 (-) True AMCG00015321
AMCG00015318 mRNA upstream 7558 7833318 ~ 7834220 (-) True AMCG00015318
AMCG00015319 mRNA upstream 31319 7857079 ~ 7861747 (-) True AMCG00015319
AMCG00015329 mRNA upstream 51674 7877434 ~ 7885936 (-) True AMCG00015329
AMCG00015327 mRNA upstream 62865 7888625 ~ 7897453 (-) True AMCG00015327
TU121101 other downstream 34752 7786087 ~ 7786442 (-) True G97125
TU120782 other downstream 899553 6917766 ~ 6921641 (-) False AMCG00015288
TU120659 other downstream 1120837 6698857 ~ 6700357 (-) True G96766
TU120625 other downstream 1436574 6377890 ~ 6384620 (-) True AMCG00015267
TU120487 other downstream 1757035 6049477 ~ 6064159 (-) False AMCG00015256
TU121448 other upstream 305547 8131307 ~ 8134115 (-) False G97411
TU121510 other upstream 584227 8409987 ~ 8411882 (-) True G97455
TU121587 other upstream 715428 8541188 ~ 8543180 (-) False AMCG00015374
TU121599 other upstream 754539 8580299 ~ 8581101 (-) False AMCG00015372
TU121952 other upstream 966348 8792108 ~ 8794774 (-) False AMCG00015393

Expression Profile