Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00015357 |
| length | 1143 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 9 |
| gene id | AMCG00015357 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 8372466 ~ 8381177 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0006260 | DNA replication | biological_process |
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| GO:0006269 | DNA replication, synthesis of RNA primer | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121380 | lncRNA | upstream | 60267 | 8307580 ~ 8312199 (+) | False | AMCG00015359 |
| TU121381 | lncRNA | upstream | 60267 | 8307580 ~ 8312199 (+) | True | AMCG00015359 |
| TU121379 | lncRNA | upstream | 66789 | 8303385 ~ 8305677 (+) | True | AMCG00015362 |
| TU121359 | lncRNA | upstream | 122181 | 8248111 ~ 8250285 (+) | True | G97350 |
| TU121356 | lncRNA | upstream | 127479 | 8242777 ~ 8244987 (+) | True | G97347 |
| TU121401 | lncRNA | downstream | 22975 | 8404152 ~ 8411881 (+) | False | AMCG00015363 |
| TU121407 | lncRNA | downstream | 96045 | 8477222 ~ 8480537 (+) | True | G97383 |
| TU121616 | lncRNA | downstream | 232078 | 8613255 ~ 8616320 (+) | True | G97543 |
| TU121620 | lncRNA | downstream | 242912 | 8624089 ~ 8624476 (+) | True | G97547 |
| TU121621 | lncRNA | downstream | 242912 | 8624089 ~ 8624687 (+) | False | G97547 |
| AMCG00015359 | mRNA | upstream | 60289 | 8308018 ~ 8312177 (+) | False | AMCG00015359 |
| AMCG00015362 | mRNA | upstream | 68349 | 8303569 ~ 8304117 (+) | False | AMCG00015362 |
| AMCG00015358 | mRNA | upstream | 69418 | 8295824 ~ 8303048 (+) | False | AMCG00015358 |
| AMCG00015356 | mRNA | upstream | 78785 | 8289015 ~ 8293681 (+) | True | AMCG00015356 |
| AMCG00015346 | mRNA | upstream | 108298 | 8259173 ~ 8264168 (+) | True | AMCG00015346 |
| AMCG00015363 | mRNA | downstream | 1492 | 8382669 ~ 8411044 (+) | True | AMCG00015363 |
| AMCG00015365 | mRNA | downstream | 46518 | 8427695 ~ 8433092 (+) | True | AMCG00015365 |
| AMCG00015364 | mRNA | downstream | 52306 | 8433483 ~ 8443894 (+) | True | AMCG00015364 |
| AMCG00015369 | mRNA | downstream | 133536 | 8514713 ~ 8524559 (+) | True | AMCG00015369 |
| AMCG00015368 | mRNA | downstream | 148966 | 8530143 ~ 8533141 (+) | False | AMCG00015368 |
| TU121378 | other | upstream | 69497 | 8295087 ~ 8302969 (+) | True | AMCG00015358 |
| TU121352 | other | upstream | 78136 | 8233424 ~ 8294330 (+) | True | G97343 |
| TU121351 | other | upstream | 78939 | 8288970 ~ 8293527 (+) | False | AMCG00015356 |
| TU121298 | other | upstream | 246009 | 8124608 ~ 8126457 (+) | True | AMCG00015343 |
| TU121271 | other | upstream | 293705 | 8074181 ~ 8078761 (+) | True | AMCG00015334 |
| TU121400 | other | downstream | 1520 | 8382697 ~ 8395409 (+) | False | AMCG00015363 |
| TU121569 | other | downstream | 147841 | 8529018 ~ 8533404 (+) | True | AMCG00015368 |
| TU121580 | other | downstream | 162147 | 8543324 ~ 8544782 (+) | True | G97513 |
| TU121633 | other | downstream | 305591 | 8686768 ~ 8687680 (+) | True | G97558 |
| TU121740 | other | downstream | 447559 | 8828736 ~ 8893016 (+) | True | AMCG00015397 |
