RNA id: AMCG00015395



Basic Information


Item Value
RNA id AMCG00015395
length 489
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00015395
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8926502 ~ 8929776 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCACCAAAGATTGGAGATCTGATTGAAATTGATCGAAAGGATTTTCAGCACTGGGCGGTGTATGTCGGGAACTGGGAGGTTGTGCACCTGACGTCCAGCACCTactaTTCCTTTTTTGCTGTCTCAAGCTCATCCTCATTCTCATTCTGCACTCGAGTCATGAAGGAGCCGCTCAGAAAGGTAGCTGGGTCCAGTCGTTGGGTAATCAACAACAAATACGACAACAACTTCCCTCCATACCCGCCCAAGAAAATCCGGAGAAGAGCTCTGAAGGAAGTGAATTCCTACAAGGATTACAACCCCATCACTTATAACTGTGAGCACTTTGCCACAGAGATGCGCTATGGCATCCCACTCTCTCTCCAGCCATTCGAAAAAAATTTAgaatttgcaaatacatTTTCCATGGTGTCCCACACCTCATCCCCCtgcccttcctcttcctccttcacGCCTTCCTCGCCCACCAACCCAGCTGGCCCCTCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121722 lncRNA upstream 135835 8789560 ~ 8790667 (+) True G97620
TU121726 lncRNA upstream 135835 8789690 ~ 8790667 (+) False G97620
TU121721 lncRNA upstream 141226 8784212 ~ 8785276 (+) True G97619
TU121720 lncRNA upstream 142511 8783746 ~ 8783991 (+) True G97618
TU121703 lncRNA upstream 147456 8777217 ~ 8779046 (+) True G97612
TU121770 lncRNA downstream 12648 8942424 ~ 8950080 (+) True G97650
TU121779 lncRNA downstream 41690 8971466 ~ 8978004 (+) False AMCG00015398
TU121783 lncRNA downstream 53726 8983502 ~ 8984908 (+) True G97663
TU121799 lncRNA downstream 94869 9024645 ~ 9030399 (+) True G97676
TU121804 lncRNA downstream 99941 9029717 ~ 9032785 (+) False AMCG00015407
AMCG00015397 mRNA upstream 35181 8886176 ~ 8891321 (+) False AMCG00015397
AMCG00015390 mRNA upstream 41605 8883119 ~ 8884897 (+) True AMCG00015390
AMCG00015392 mRNA upstream 94788 8825512 ~ 8831714 (+) True AMCG00015392
AMCG00015389 mRNA upstream 117301 8802427 ~ 8809201 (+) True AMCG00015389
AMCG00015391 mRNA upstream 126224 8798233 ~ 8800278 (+) True AMCG00015391
AMCG00015396 mRNA downstream 21960 8951736 ~ 8953684 (+) False AMCG00015396
AMCG00015399 mRNA downstream 34684 8964460 ~ 8965650 (+) True AMCG00015399
AMCG00015398 mRNA downstream 45566 8975342 ~ 8977087 (+) True AMCG00015398
AMCG00015407 mRNA downstream 99781 9029557 ~ 9036615 (+) True AMCG00015407
AMCG00015406 mRNA downstream 126997 9056773 ~ 9063476 (+) True AMCG00015406
TU121740 other upstream 33486 8828736 ~ 8893016 (+) True AMCG00015397
TU121749 other upstream 42549 8877292 ~ 8883953 (+) False AMCG00015390
TU121633 other upstream 238822 8686768 ~ 8687680 (+) True G97558
TU121580 other upstream 381720 8543324 ~ 8544782 (+) True G97513
TU121569 other upstream 393098 8529018 ~ 8533404 (+) True AMCG00015368
TU121758 other downstream 22017 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other downstream 22017 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other downstream 22017 8951793 ~ 8953675 (+) False AMCG00015396
TU121801 other downstream 99941 9029717 ~ 9032785 (+) False AMCG00015407
TU122193 other downstream 776321 9706097 ~ 9710729 (+) True G98000

Expression Profile