RNA id: AMCG00015427



Basic Information


Item Value
RNA id AMCG00015427
length 330
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00015427
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9383674 ~ 9387025 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCAGTGCGGAATCCCGCCGATAAGTGTCATTTCGGTGGCTTCGTGAAACTCATGAGCTCGCCGGCGCCGCTGGTGTCGGTGGATTTCGAGGTGTTCGGCGAAtacacAGAGGAGCAGGGCAGGAAGCTGAAACTGGTGGGCTGGGTGAGGAACACCAACCGGGACACAGTGGAGGGACAGGTGCAGGGGCCCCCCGATGCCGTTGCAAGGATgAAAGACTGGTTGAGGGCGACCGGCAGCCCCATGTCTCGCATCGACAGAGCCGCCTTCAGCAACGAGAGGGAGATCCCCGCCCTCGAATTCAAGGACTTCACCACCAAATATTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121919 lncRNA upstream 36430 9345762 ~ 9347244 (+) True G97777
TU121911 lncRNA upstream 52648 9327636 ~ 9331026 (+) True G97770
TU121863 lncRNA upstream 61990 9321042 ~ 9321684 (+) True G97730
TU121883 lncRNA upstream 145332 9237833 ~ 9238342 (+) True G97745
TU121878 lncRNA upstream 160417 9222636 ~ 9223257 (+) True G97741
TU122162 lncRNA downstream 242114 9629139 ~ 9631892 (+) True AMCG00015445
TU122181 lncRNA downstream 268443 9655468 ~ 9657866 (+) True G97989
TU122191 lncRNA downstream 315811 9702836 ~ 9703109 (+) True G97998
TU122192 lncRNA downstream 318699 9705724 ~ 9706036 (+) True G97999
TU122221 lncRNA downstream 372547 9759572 ~ 9760688 (+) True G98025
AMCG00015428 mRNA upstream 4614 9356963 ~ 9379060 (+) True AMCG00015428
AMCG00015425 mRNA upstream 27957 9348585 ~ 9355717 (+) True AMCG00015425
AMCG00015426 mRNA upstream 57060 9323555 ~ 9326614 (+) True AMCG00015426
AMCG00015417 mRNA upstream 122001 9258182 ~ 9261673 (+) True AMCG00015417
AMCG00015416 mRNA upstream 208191 9155498 ~ 9175483 (+) True AMCG00015416
AMCG00015434 mRNA downstream 12405 9399430 ~ 9401380 (+) True AMCG00015434
AMCG00015433 mRNA downstream 28858 9415883 ~ 9435428 (+) True AMCG00015433
AMCG00015432 mRNA downstream 53403 9440428 ~ 9442795 (+) True AMCG00015432
AMCG00015437 mRNA downstream 77299 9464324 ~ 9465756 (+) True AMCG00015437
AMCG00015436 mRNA downstream 86147 9473172 ~ 9498979 (+) True AMCG00015436
TU121801 other upstream 350889 9029717 ~ 9032785 (+) False AMCG00015407
TU121758 other upstream 429999 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other upstream 429999 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other upstream 429999 8951793 ~ 8953675 (+) False AMCG00015396
TU121749 other upstream 499721 8877292 ~ 8883953 (+) False AMCG00015390
TU122193 other downstream 319072 9706097 ~ 9710729 (+) True G98000
TU122222 other downstream 370048 9757073 ~ 9758430 (+) False G98025
TU122266 other downstream 428693 9815718 ~ 9872005 (+) True G98053
TU122294 other downstream 542567 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 698403 10085428 ~ 10086512 (+) False G98093

Expression Profile