RNA id: AMCG00015432



Basic Information


Item Value
RNA id AMCG00015432
length 1296
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00015432
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9440428 ~ 9442795 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATGACCCTTGCGCCAGCCTGGCAGACTACTATTCCGACCCCCTCCCGGCCGGCGCCGTGGTCCCGGGCCCCGTCTGGAACCATAACTGCGACTATGGGCCCCTGCCGGGCGATGGGGCTGGGCAGCAGGAGGTGGAGACGGGTGATCGGGCCTACGTTGTGGCCCGGGTTGTCATCGGGGTGGCGCTGGCGGGCATCATGCTGACCTGCGGGGTGGGCAACGGCCTGTTTATCGCCACCCTGGCACGCTTCCACAAGCTGCGCAGCGTCACCAACCTCCTGGTGGCCAACCTGGCCGTGTCGGACCTGCTGGTGGCAGCCGTGTGCTGCCCCTTCGAGATGGACTACTACGTGGTGCGCCAGCTGTCCTGGAGCTTCGGCCCGGCGCTGTGCTCCTCCGTCACCTACCTACGCGCTGTGTCCCTGTACGTCTCCACCGACGCCCTGCTGGCCATCGCCGTGGACCGGTACCTGGTCATCATTCACCCTCTGAGGCCCCGCATGAAGCTCCAGACGGCCTGTGGCGTCCTGGCAGGCATCTGGCTGCTGTCGCTGCTGGTGGCGCTGCCCTCCGCCTACTTCGCCACCCACACCCACTTCGGCGCCTTCCAGAAGGCTGGGCAGAAGACCTACTGTGTGCAGATCTGGACCGCAGACCAGGCTTCCCTCTACAAGCcctacttcctcttcctgttCGTGGCCCAGTTCCTGGGGCCCGTACTGGCGATGACGGGCTGCTACGCCTGCATCTGCCGCAAGCTGTGGACCAAGGACCTGCCCGGGGTGCAGACAGCGCAGCTCCGGGGGCGCCTGCGTGCCCGGAGGAAGACCGTGCTGGTGCTGGTGGGCGTCCTGGTCAGCTACGTCCTGTGCTGGGCGCCCTACTATGGCTACGCCATCGTGCGGGACTTCTTCCCCGGCCTGCTGCTGCCTGTCACCCACTCCGTGTCGCTGTACTACCTGGTGGAGTGCATCGCCATGAGCAACAGCGTCATCAACACCGTCTTCTTCATCCTGGTCAAGAACAACACTGGCAAGTACGTCAAGCGCCTCCTCCTGCACCGTCACCAGTGCCACCGCCGCAGCCCAGAGAAGAGCACCGTCGAGTGCCGCTCCTcgctgccaccaccaccacagccCTGCCTCTCCCCGCCTGCCCCCCCGCCGAGCTGTTCCACGGAGAAGCAGCGCGAACATCGCCCCACGACGCACCCGCCACCGCCCTCTCCTGGGTGTTGCACACCAGGAAGTGAGACACGGCGACACAATGGATCCCAGGACACGAAGATGTGA

Function


GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121919 lncRNA upstream 93184 9345762 ~ 9347244 (+) True G97777
TU121911 lncRNA upstream 109402 9327636 ~ 9331026 (+) True G97770
TU121863 lncRNA upstream 118744 9321042 ~ 9321684 (+) True G97730
TU121883 lncRNA upstream 202086 9237833 ~ 9238342 (+) True G97745
TU121878 lncRNA upstream 217171 9222636 ~ 9223257 (+) True G97741
TU122162 lncRNA downstream 186344 9629139 ~ 9631892 (+) True AMCG00015445
TU122181 lncRNA downstream 212673 9655468 ~ 9657866 (+) True G97989
TU122191 lncRNA downstream 260041 9702836 ~ 9703109 (+) True G97998
TU122192 lncRNA downstream 262929 9705724 ~ 9706036 (+) True G97999
TU122221 lncRNA downstream 316777 9759572 ~ 9760688 (+) True G98025
AMCG00015433 mRNA upstream 5000 9415883 ~ 9435428 (+) True AMCG00015433
AMCG00015434 mRNA upstream 39048 9399430 ~ 9401380 (+) True AMCG00015434
AMCG00015427 mRNA upstream 53403 9383674 ~ 9387025 (+) True AMCG00015427
AMCG00015428 mRNA upstream 61368 9356963 ~ 9379060 (+) True AMCG00015428
AMCG00015425 mRNA upstream 84711 9348585 ~ 9355717 (+) True AMCG00015425
AMCG00015437 mRNA downstream 21529 9464324 ~ 9465756 (+) True AMCG00015437
AMCG00015436 mRNA downstream 30377 9473172 ~ 9498979 (+) True AMCG00015436
AMCG00015435 mRNA downstream 130073 9572868 ~ 9585537 (+) True AMCG00015435
AMCG00015444 mRNA downstream 178937 9621732 ~ 9624582 (+) True AMCG00015444
AMCG00015445 mRNA downstream 181794 9624589 ~ 9629786 (+) False AMCG00015445
TU121801 other upstream 407643 9029717 ~ 9032785 (+) False AMCG00015407
TU121758 other upstream 486753 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other upstream 486753 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other upstream 486753 8951793 ~ 8953675 (+) False AMCG00015396
TU121749 other upstream 556475 8877292 ~ 8883953 (+) False AMCG00015390
TU122193 other downstream 263302 9706097 ~ 9710729 (+) True G98000
TU122222 other downstream 314278 9757073 ~ 9758430 (+) False G98025
TU122266 other downstream 372923 9815718 ~ 9872005 (+) True G98053
TU122294 other downstream 486797 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 642633 10085428 ~ 10086512 (+) False G98093

Expression Profile