RNA id: AMCG00015444


Basic Information

Item Value
RNA id AMCG00015444
length 1287
RNA type mRNA
GC content 0.59
exon number 5
gene id AMCG00015444
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9621732 ~ 9624582 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCGCCTATGTGCGGACAGGGTTATCCTTGGGATCCCCTACCGTCAGAGCTGGAGTCAGTCGAGTGTATTAATAATACGAGTTAATGCGATCTTGACCATTTACCAAGAGACGTAGGGGAAATACACTCGTTTAAACCATGAAGCTTAAAAGCCCGATATTGATATAcgcacagtgacagtgtgtgagcTGTCATATGCGAATACCGGACACGCGTTTGCAGGTTAGTTTTCAGGAAAATGTTCTTTAGGGTCAAAGTGCGTTTTTGTTGTAGGCGATAAACCCTGCCTGCGCATCATCGCTGTGTCGGTGTTTCGGGTCAATGCTGTGGCGCTGGCCGCTCTGGAGCCGAGTGCGGTCCTTCTCCGGGGGACACTTGGGACACATCTGGCTGTCTGGGAGGAGAGGCCCCGGTGAGCAGCACAGGATGTCCTCCTCCAATCCTGTGGCAGCGCTGTGTCAGGTGACCGCCACACCGGACAAGGAGGCCAATTTCGAGTCCTGCAGTGGGTTGGTGGAGCAGGCCCGGGAAGGCGGGGCTTGCATGGCCTTCCTCCCCGAGGGCTTCGACTTCATCGGCTCGAGTCGCGAGGAGACGCTGCGGCTGTCCGAGACGCTGGAGGGAGAGACGATCGGGCGCTACGCACAGCTGGCCAGGAAGCTGGGGGTCTGGCTGTCCCTGGGGGGGTTTCACGAGCGAGGGCATGACTGGGAGAGCGACCGACGCATCTACAACAGTCATGTGATCATCAATGACCAGGGTACTGCCTGCAGAACACCACACTTACTCTTTACATTCATATAATTGGGGaggggaaggagaggagaggtgaTGCACACTGTTCCTCCCAAGAACAGAGGCTCAGCCAGTGTCCCTTTCCCAGGGTGCATTGCTTCAGTATACAGGAAGTGCCACCTATTTGACGTGGAGCTGCCAGGAAGAGGCGTGTCCCTGAAAGAGAGTGCCTTCACCATTCCAGGACCCCGCATCGTCCCCCCAGTACAGACCCCCCTCGGCAAGGGTGCGGAGATTCTGACCTATCCCTCGGCCTTCACTGTGGCGACAGGAGCCGCCCACTGGGAGGTGGGCCGCCACCACGCCCACCGCGCCTCCTACGGCCACGCCCTGGCGGTGGACCCCTGGGGCGAGCTGGTTGGCCGCTGCGGGGGGGCAGAGCCGGGGCTGGCGCTGGTGGAGATCGACCTGCAGAAGCTGCGCAGCGTGAGGAGAGACATGCCAGTGCAGCAGCACAGGAGAGAGCACAGCCTGTATGACTGTCAGGACTGA

Function

GO: NA

KEGG:

id description
K11206 NIT1, ybeM; deaminated glutathione amidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121919 lncRNA upstream 274488 9345762 ~ 9347244 (+) True G97777
TU121911 lncRNA upstream 290706 9327636 ~ 9331026 (+) True G97770
TU121863 lncRNA upstream 300048 9321042 ~ 9321684 (+) True G97730
TU121883 lncRNA upstream 383390 9237833 ~ 9238342 (+) True G97745
TU121878 lncRNA upstream 398475 9222636 ~ 9223257 (+) True G97741
TU122162 lncRNA downstream 4557 9629139 ~ 9631892 (+) True AMCG00015445
TU122181 lncRNA downstream 30886 9655468 ~ 9657866 (+) True G97989
TU122191 lncRNA downstream 78254 9702836 ~ 9703109 (+) True G97998
TU122192 lncRNA downstream 81142 9705724 ~ 9706036 (+) True G97999
TU122221 lncRNA downstream 134990 9759572 ~ 9760688 (+) True G98025
AMCG00015435 mRNA upstream 36195 9572868 ~ 9585537 (+) True AMCG00015435
AMCG00015436 mRNA upstream 122753 9473172 ~ 9498979 (+) True AMCG00015436
AMCG00015437 mRNA upstream 155976 9464324 ~ 9465756 (+) True AMCG00015437
AMCG00015432 mRNA upstream 178937 9440428 ~ 9442795 (+) True AMCG00015432
AMCG00015433 mRNA upstream 186304 9415883 ~ 9435428 (+) True AMCG00015433
AMCG00015445 mRNA downstream 7 9624589 ~ 9629786 (+) False AMCG00015445
AMCG00015443 mRNA downstream 18540 9643122 ~ 9644228 (+) True AMCG00015443
AMCG00015450 mRNA downstream 72718 9697300 ~ 9702772 (+) True AMCG00015450
AMCG00015461 mRNA downstream 147992 9772574 ~ 9810428 (+) True AMCG00015461
AMCG00015455 mRNA downstream 191549 9816131 ~ 9819910 (+) True AMCG00015455
TU121801 other upstream 588947 9029717 ~ 9032785 (+) False AMCG00015407
TU121758 other upstream 668057 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other upstream 668057 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other upstream 668057 8951793 ~ 8953675 (+) False AMCG00015396
TU121749 other upstream 737779 8877292 ~ 8883953 (+) False AMCG00015390
TU122193 other downstream 81515 9706097 ~ 9710729 (+) True G98000
TU122222 other downstream 132491 9757073 ~ 9758430 (+) False G98025
TU122266 other downstream 191136 9815718 ~ 9872005 (+) True G98053
TU122294 other downstream 305010 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 460846 10085428 ~ 10086512 (+) False G98093

Expression Profile