RNA id: AMCG00015459



Basic Information


Item Value
RNA id AMCG00015459
length 267
RNA type mRNA
GC content 0.69
exon number 3
gene id AMCG00015459
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9869142 ~ 9872454 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGCGACATCCTGGAGGCCCAGATCAGCCCGGACCGGCCCGGTTCTGCCAATGTGGAGCGCAGCGCCATGCTCAAGCTGTGCGCTTTGGGCTCGGGGGGCGGGAcgggaggggaggtgggggcagggggtggaggggggtgggagcgtgaggaggaggaggaggaggaagaggaggaggaggaggaagaggagcgGCGCGTCTCCACACCCGTGCTGGGCGCTCATCTTCAGGCGCTTGGCTGGGTCCACTGTCAACAGGCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU122272 lncRNA upstream 7006 9859098 ~ 9862136 (+) False AMCG00015456
TU122221 lncRNA upstream 108454 9759572 ~ 9760688 (+) True G98025
TU122192 lncRNA upstream 163106 9705724 ~ 9706036 (+) True G97999
TU122191 lncRNA upstream 166033 9702836 ~ 9703109 (+) True G97998
TU122181 lncRNA upstream 211276 9655468 ~ 9657866 (+) True G97989
TU122278 lncRNA downstream 6005 9878459 ~ 9879136 (+) True G98060
TU122320 lncRNA downstream 128760 10001214 ~ 10012888 (+) False AMCG00015475
TU122474 lncRNA downstream 324173 10196627 ~ 10197404 (+) True G98195
TU122489 lncRNA downstream 346100 10218554 ~ 10222496 (+) True AMCG00015492
TU122548 lncRNA downstream 450804 10323258 ~ 10323970 (+) True G98255
AMCG00015458 mRNA upstream 324 9863748 ~ 9868818 (+) True AMCG00015458
AMCG00015456 mRNA upstream 7654 9851672 ~ 9861488 (+) True AMCG00015456
AMCG00015457 mRNA upstream 26734 9824915 ~ 9842408 (+) True AMCG00015457
AMCG00015455 mRNA upstream 49232 9816131 ~ 9819910 (+) True AMCG00015455
AMCG00015461 mRNA upstream 58714 9772574 ~ 9810428 (+) True AMCG00015461
AMCG00015467 mRNA downstream 38825 9911279 ~ 9915357 (+) True AMCG00015467
AMCG00015465 mRNA downstream 48532 9920986 ~ 9925429 (+) True AMCG00015465
AMCG00015464 mRNA downstream 57161 9929615 ~ 9930846 (+) True AMCG00015464
AMCG00015466 mRNA downstream 62689 9935143 ~ 9943673 (+) True AMCG00015466
AMCG00015462 mRNA downstream 73380 9945834 ~ 9947066 (+) True AMCG00015462
TU122222 other upstream 110712 9757073 ~ 9758430 (+) False G98025
TU122193 other upstream 158413 9706097 ~ 9710729 (+) True G98000
TU121801 other upstream 836357 9029717 ~ 9032785 (+) False AMCG00015407
TU121759 other upstream 915467 8951793 ~ 8953675 (+) False AMCG00015396
TU122294 other downstream 57138 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 212974 10085428 ~ 10086512 (+) False G98093
TU122336 other downstream 212974 10085428 ~ 10086512 (+) True G98093
TU122488 other downstream 340547 10213001 ~ 10217201 (+) False AMCG00015492
TU122544 other downstream 444454 10316908 ~ 10317325 (+) True G98251

Expression Profile