RNA id: AMCG00015463



Basic Information


Item Value
RNA id AMCG00015463
length 637
RNA type mRNA
GC content 0.54
exon number 5
gene id AMCG00015463
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9961526 ~ 9965454 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGCTGTGTATATAAGGGGAGAGCTGCTGGAGATGACTGTGTCAGTCCAGCCGAAGCAAGCATGCGACCCGTTACTGTGGTGACCATCTGCCTCTGTCTGGTCCTGTCCATCGAAGCCCAGAGACCCAAACCATGTGAGTCTCCACCTCTTCTGGAGGGGATGGTGACTGTGatgGAATCTCCCACCTTCAAGATGACCGGTAGCTTGTTCTTCTATGACGGGCTCCTCAAGAGACTCCGGCTCCTGGCGAATGCGACTGGAGATGCACAGGACACCCTGCTGCTCTtcagagaggtgtggACCTACTACAGTCACTTCACCAAGTTTGGCTGCCTGCCCTTCTCAGAGATCTACTACACCCCCACGAACAGCTGGTACATCTCgtatTTTAACATGGGCAGAGGGATCCGGGACCCCAATGTGTTCATCCCTCCCCCCTTCTGTGAGGAGAAGGGGAGCAGGCCGGAGGTGCTCTGAGCGTCTGTCTGTGGGACTGAAGCTGATGTTCGTTGTGTCATTGGTGCCAGCTGAGGAGCGTGGGAACAGAGCAAAAGTGCTGAACCTACCCACCCCCACGGTGTCCTGAGTGGacctgttaattaattaattaatcaataaacaaGCACTAATTTGTCCA

Function


GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU122278 lncRNA upstream 82390 9878459 ~ 9879136 (+) True G98060
TU122272 lncRNA upstream 99390 9859098 ~ 9862136 (+) False AMCG00015456
TU122221 lncRNA upstream 200838 9759572 ~ 9760688 (+) True G98025
TU122192 lncRNA upstream 255490 9705724 ~ 9706036 (+) True G97999
TU122191 lncRNA upstream 258417 9702836 ~ 9703109 (+) True G97998
TU122320 lncRNA downstream 35760 10001214 ~ 10012888 (+) False AMCG00015475
TU122474 lncRNA downstream 231173 10196627 ~ 10197404 (+) True G98195
TU122489 lncRNA downstream 253100 10218554 ~ 10222496 (+) True AMCG00015492
TU122548 lncRNA downstream 357804 10323258 ~ 10323970 (+) True G98255
TU122533 lncRNA downstream 373654 10339108 ~ 10340845 (+) True G98244
AMCG00015462 mRNA upstream 14460 9945834 ~ 9947066 (+) True AMCG00015462
AMCG00015466 mRNA upstream 17853 9935143 ~ 9943673 (+) True AMCG00015466
AMCG00015464 mRNA upstream 30680 9929615 ~ 9930846 (+) True AMCG00015464
AMCG00015465 mRNA upstream 36097 9920986 ~ 9925429 (+) True AMCG00015465
AMCG00015467 mRNA upstream 46169 9911279 ~ 9915357 (+) True AMCG00015467
AMCG00015472 mRNA downstream 17348 9982802 ~ 9986495 (+) True AMCG00015472
AMCG00015474 mRNA downstream 23198 9988652 ~ 9996158 (+) True AMCG00015474
AMCG00015475 mRNA downstream 41149 10006603 ~ 10012861 (+) True AMCG00015475
AMCG00015476 mRNA downstream 47612 10013066 ~ 10015706 (+) True AMCG00015476
AMCG00015473 mRNA downstream 51002 10016456 ~ 10027569 (+) True AMCG00015473
TU122294 other upstream 30722 9929592 ~ 9930804 (+) False AMCG00015464
TU122266 other upstream 89521 9815718 ~ 9872005 (+) True G98053
TU122222 other upstream 203096 9757073 ~ 9758430 (+) False G98025
TU122193 other upstream 250797 9706097 ~ 9710729 (+) True G98000
TU121801 other upstream 928741 9029717 ~ 9032785 (+) False AMCG00015407
TU122332 other downstream 119974 10085428 ~ 10086512 (+) False G98093
TU122336 other downstream 119974 10085428 ~ 10086512 (+) True G98093
TU122488 other downstream 247547 10213001 ~ 10217201 (+) False AMCG00015492
TU122544 other downstream 351454 10316908 ~ 10317325 (+) True G98251
TU122613 other downstream 482712 10448166 ~ 10450663 (+) True G98302

Expression Profile