Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00015464 |
| length | 679 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | AMCG00015464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 9929592 ~ 9930846 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042775 | mitochondrial ATP synthesis coupled electron transport | biological_process |
| GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | biological_process |
| GO:0022900 | electron transport chain | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122278 | lncRNA | upstream | 50479 | 9878459 ~ 9879136 (+) | True | G98060 |
| TU122272 | lncRNA | upstream | 67479 | 9859098 ~ 9862136 (+) | False | AMCG00015456 |
| TU122221 | lncRNA | upstream | 168927 | 9759572 ~ 9760688 (+) | True | G98025 |
| TU122192 | lncRNA | upstream | 223579 | 9705724 ~ 9706036 (+) | True | G97999 |
| TU122191 | lncRNA | upstream | 226506 | 9702836 ~ 9703109 (+) | True | G97998 |
| TU122320 | lncRNA | downstream | 70368 | 10001214 ~ 10012888 (+) | False | AMCG00015475 |
| TU122474 | lncRNA | downstream | 265781 | 10196627 ~ 10197404 (+) | True | G98195 |
| TU122489 | lncRNA | downstream | 287708 | 10218554 ~ 10222496 (+) | True | AMCG00015492 |
| TU122548 | lncRNA | downstream | 392412 | 10323258 ~ 10323970 (+) | True | G98255 |
| TU122533 | lncRNA | downstream | 408262 | 10339108 ~ 10340845 (+) | True | G98244 |
| AMCG00015465 | mRNA | upstream | 4186 | 9920986 ~ 9925429 (+) | True | AMCG00015465 |
| AMCG00015467 | mRNA | upstream | 14258 | 9911279 ~ 9915357 (+) | True | AMCG00015467 |
| AMCG00015459 | mRNA | upstream | 57161 | 9869142 ~ 9872454 (+) | True | AMCG00015459 |
| AMCG00015458 | mRNA | upstream | 60797 | 9863748 ~ 9868818 (+) | True | AMCG00015458 |
| AMCG00015456 | mRNA | upstream | 68127 | 9851672 ~ 9861488 (+) | True | AMCG00015456 |
| AMCG00015466 | mRNA | downstream | 4297 | 9935143 ~ 9943673 (+) | True | AMCG00015466 |
| AMCG00015462 | mRNA | downstream | 14988 | 9945834 ~ 9947066 (+) | True | AMCG00015462 |
| AMCG00015463 | mRNA | downstream | 30680 | 9961526 ~ 9965454 (+) | True | AMCG00015463 |
| AMCG00015472 | mRNA | downstream | 51956 | 9982802 ~ 9986495 (+) | True | AMCG00015472 |
| AMCG00015474 | mRNA | downstream | 57806 | 9988652 ~ 9996158 (+) | True | AMCG00015474 |
| TU122266 | other | upstream | 57610 | 9815718 ~ 9872005 (+) | True | G98053 |
| TU122222 | other | upstream | 171185 | 9757073 ~ 9758430 (+) | False | G98025 |
| TU122193 | other | upstream | 218886 | 9706097 ~ 9710729 (+) | True | G98000 |
| TU121801 | other | upstream | 896830 | 9029717 ~ 9032785 (+) | False | AMCG00015407 |
| TU121760 | other | upstream | 975940 | 8951793 ~ 8953675 (+) | False | AMCG00015396 |
| TU122332 | other | downstream | 154582 | 10085428 ~ 10086512 (+) | False | G98093 |
| TU122336 | other | downstream | 154582 | 10085428 ~ 10086512 (+) | True | G98093 |
| TU122488 | other | downstream | 282155 | 10213001 ~ 10217201 (+) | False | AMCG00015492 |
| TU122544 | other | downstream | 386062 | 10316908 ~ 10317325 (+) | True | G98251 |
| TU122613 | other | downstream | 517320 | 10448166 ~ 10450663 (+) | True | G98302 |
