RNA id: AMCG00015485


Basic Information

Item Value
RNA id AMCG00015485
length 294
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00015485
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10110395 ~ 10111184 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGCGCGCGctGTGATCCACACAGTTGGCCCCATTGTGCAGGCCGGGTCGGTGGGGGGTGCAGAGAGGCAAGCTCTACGCAGCTGCTACTGGAACTGCCTGCAGACAGCCACCCAGCACCAGCTCAGGACcgtggtgagagagagagagggagaggagagggggaatGGGGAGAAGGGGGCGGAGGAGGGAGaaaggaggagagacagaggggtgGAGAGGGAGTGGGGTCGAAGGAGGAGGGAGCAGggaggagggagaaagagagggaggggaggaaagGGGAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122438 lncRNA downstream 34502 10026114 ~ 10075893 (-) True G98163
TU122439 lncRNA downstream 85319 10021351 ~ 10025076 (-) False AMCG00015479
TU122440 lncRNA downstream 88840 10018764 ~ 10021555 (-) False AMCG00015479
TU122412 lncRNA downstream 123767 9974041 ~ 9986628 (-) True AMCG00015468
TU122408 lncRNA downstream 172073 9937076 ~ 9938322 (-) True G98138
TU122498 lncRNA upstream 61917 10173101 ~ 10222525 (-) True G98216
TU122570 lncRNA upstream 176842 10288026 ~ 10340868 (-) True G98269
TU122588 lncRNA upstream 267101 10378285 ~ 10380049 (-) True AMCG00015501
TU122626 lncRNA upstream 378395 10489579 ~ 10493106 (-) True G98314
TU122734 lncRNA upstream 556705 10667889 ~ 10704395 (-) False AMCG00015519
AMCG00015486 mRNA downstream 9766 10083788 ~ 10100629 (-) True AMCG00015486
AMCG00015479 mRNA downstream 84376 10021365 ~ 10026019 (-) True AMCG00015479
AMCG00015478 mRNA downstream 106135 10003136 ~ 10004260 (-) True AMCG00015478
AMCG00015477 mRNA downstream 107307 9997063 ~ 10003088 (-) True AMCG00015477
AMCG00015468 mRNA downstream 130770 9973956 ~ 9979625 (-) False AMCG00015468
AMCG00015487 mRNA upstream 10815 10121999 ~ 10128211 (-) True AMCG00015487
AMCG00015497 mRNA upstream 77658 10188842 ~ 10193858 (-) True AMCG00015497
AMCG00015493 mRNA upstream 84380 10195564 ~ 10198602 (-) True AMCG00015493
AMCG00015495 mRNA upstream 89596 10200780 ~ 10211282 (-) True AMCG00015495
AMCG00015496 mRNA upstream 142508 10253692 ~ 10259089 (-) True AMCG00015496
TU122362 other downstream 270885 9837502 ~ 9839510 (-) True G98094
TU122072 other downstream 754663 9353217 ~ 9355732 (-) True G97897
TU122046 other downstream 931728 9176218 ~ 9178667 (-) False AMCG00015419
TU122010 other downstream 1070254 9038614 ~ 9040141 (-) True AMCG00015409
TU121992 other downstream 1150251 8956415 ~ 8960144 (-) False AMCG00015400
TU122506 other upstream 79237 10190421 ~ 10192287 (-) False AMCG00015497
TU122509 other upstream 85434 10196618 ~ 10198654 (-) False AMCG00015493
TU122510 other upstream 85434 10196618 ~ 10198654 (-) False AMCG00015493
TU122511 other upstream 85434 10196618 ~ 10198654 (-) False AMCG00015493
TU122512 other upstream 85434 10196618 ~ 10198654 (-) False AMCG00015493

Expression Profile