RNA id: AMCG00015514


Basic Information

Item Value
RNA id AMCG00015514
length 2157
RNA type mRNA
GC content 0.62
exon number 14
gene id AMCG00015514
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10493140 ~ 10505219 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAGAAAAGCAACGGGGGATCTGAGCCGGGCGAGTTTAATCAAATCCAGCCATGGGTCGCAGGAAAAGTTTTACTTCGCGTTAAAGAACAGCCCCGCGCATGCGCAGCCGGTTCCGCCGCCATCGGCGCTGTCTTGCGGAAGCCGCGGCCCGTCCTCAGACACGTGTGTCCCGCAGCAGCCCGCGTCTCTGCCCGGTATCGGCGATGGTCCCCGTGTGCACCTGTCAGGGAAAATGACCGACCGACGATAGAGCAAGGAAGACGAGAGTAAGCACATCATGCCTCGCAAGGACGCCCCCGTGGATCGAGGCTGCGTGGTGGGGATTATTTTCTTCATCCTCGGCCTGGGAACACTGCTGCCATGGAACTTCTTCCTGACCGCGACGATGtatTTCCAGCGGCGGCTCCAGGCCCCGGTGAACGTGAACGTGTCCGAGCTGCTGAACGGCACTGCGCCGGTCCAAAAGGAGTACTACTTCAACAACTGGATGACCCTGCTCTCCCAGCTGCCCCTGCTCCTCTTCACGTTCCTCAACTCCTTCCTGTACCAGAGGGTGTCTGAGATGATGCGCATCGCCGGCAGCCTGGTGTTCATATTCCTGCTGTTCCTGCTGACCGCCGTGCTGGTCAAGATCGACCTGGACCAGGACCTGTTCTTCTCCCTCACAATGGCCACCATCTGGTTCATCAACTCCTTCGGCGCAGTGCTGCAGGGCAGTCTGTTTGGCCTGGTGGGGATGTTGCCTCGGAGGTACAGCACGGTGTTCATGAGCGGGCAGGGTCTGGCAGGCACCTTCGCCACCCTCGCCATGATCCTCTCCATCGCCAGTGAGACGGACTTCGAGACGGCCGCCCTGGGCTACTTCATCACGCCCTGCGTCGGCACGCTAGTCACCGTGCTGAGCTACCTGCTGCTGCCACGCCTGgagtTTTATAAGTTCTACTCCACTGGGCAGAAGTATGAGCAGGAGACCAACGACACGCTGCTCCACAAAGAGGAGAACGGAGTGGCCCTGGACGGCGAGCAGCTGAACGGTCACACCAACGGCAAGGCAGTCTGTGCCGACAACTCCCCGGCCCCCGGCAGCCTGGGGGAGGCCGGCGGCTCGGGGCCCAGCCAGGCCTTCCTGACGCTGGAGGAGGGGGACGGCCACACACCCACGGCCGGGGCCTCCAAGGGCAACAAGGCCTCCCTACTGCAGGTCTTCAAGAAGGTGCGCGTGATGGCGTTCTGCGTGACCTTCGTCTTCACCGTCACACTCTCCGTGTTCCCCGCCGTCACGGCTGACGTCAAGACCCGCATCCAGGGGAAGTGGGTGTCGTATTTCATACCAGTTTGCTGCTTCCTGGCGTTCAATCTGATGGACTGGTTCGGGAGGACCATCACCACCTGGCTTTGTTGGcCCAAGAAGGAGAGCCCTCTGTTCCCGGCGCTGGTGTGCGCACGCGTCGTGTTCATCCCGCTGCTCATGCTGTGTAACGTAGAGCCCCGCTGGCTGATGCCCGTCTGGTTCTCCCATGATGCCTGGTTCGCTTTCTTCATGCTGCTGTTCGCCGGCTCCAGCGGCTACTTTGTCTGCCTGTCCATGTCCTACGCCCCGCAgctggTGGAGCCCCAGGACGCGGAGACGGCGGGGGCACTCATGACATTCTTCCTGGCGCTGGGTCTGTCCCTGGGGGCCGCGCTGTCCTTTGCCCTGAGGGCCCTGGTGTAAAGGGGCCACACCGTGCACCCGGGCTCGTCTCCCATGCGCCGCCGCTTCTCTCCATCCCGCCTGGCTCCCATGCTCGGGGTCTAAGGGGTCTGCGGTCTGCCTCAGATTTGATCTGTGGCCCTATAGGCCTGGCTGTGGAGCACCCACTGCACAGTAGAGTATGCAAGGACTGGGCTCTccagtccccacagcgctggctccagtctggtcCCCTATAGTAATTCCCTTCAGTATTCAGAATGCCAGTCAGGGGGCTTGTCTTTTCACTCCCCCAGCGCTGTTCAGACCCTGCAGAGTGGCTCTCCAGGGCCAGGGCCAGCTCTCTGAAGCAGGGCGGCCTCAGAGCAACTCGAGGGGCTGCagaccctgccccccccccccccccccccccccccccgtactgtactgtactgttattatgtattatattattattattagtt

Function

GO: NA

KEGG:

id description
K15014 SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122626 lncRNA downstream 34 10489579 ~ 10493106 (-) True G98314
TU122588 lncRNA downstream 113091 10378285 ~ 10380049 (-) True AMCG00015501
TU122570 lncRNA downstream 152272 10288026 ~ 10340868 (-) True G98269
TU122498 lncRNA downstream 270615 10173101 ~ 10222525 (-) True G98216
TU122493 lncRNA downstream 327743 10107233 ~ 10165397 (-) True G98211
TU122734 lncRNA upstream 162670 10667889 ~ 10704395 (-) False AMCG00015519
TU122740 lncRNA upstream 203202 10708421 ~ 10708752 (-) True G98399
TU122857 lncRNA upstream 343070 10848289 ~ 10849258 (-) False AMCG00015524
TU122894 lncRNA upstream 638299 11143518 ~ 11149864 (-) True G98510
TU122914 lncRNA upstream 827444 11332663 ~ 11334847 (-) True AMCG00015540
AMCG00015508 mRNA downstream 32405 10450229 ~ 10460735 (-) True AMCG00015508
AMCG00015506 mRNA downstream 56130 10431798 ~ 10437010 (-) True AMCG00015506
AMCG00015507 mRNA downstream 88284 10394444 ~ 10404856 (-) True AMCG00015507
AMCG00015501 mRNA downstream 107761 10379770 ~ 10385379 (-) False AMCG00015501
AMCG00015500 mRNA downstream 137175 10353209 ~ 10355965 (-) True AMCG00015500
AMCG00015515 mRNA upstream 24834 10530053 ~ 10538036 (-) True AMCG00015515
AMCG00015518 mRNA upstream 129696 10634915 ~ 10636279 (-) True AMCG00015518
AMCG00015519 mRNA upstream 149966 10655185 ~ 10668046 (-) True AMCG00015519
AMCG00015526 mRNA upstream 271611 10776830 ~ 10795268 (-) True AMCG00015526
AMCG00015523 mRNA upstream 293201 10798420 ~ 10803527 (-) True AMCG00015523
TU122572 other downstream 152272 10325999 ~ 10340868 (-) False G98269
TU122510 other downstream 294486 10196618 ~ 10198654 (-) False AMCG00015493
TU122879 other upstream 509406 11014625 ~ 11245562 (-) True G98502
TU122882 other upstream 509406 11014625 ~ 11245562 (-) False G98502
TU122884 other upstream 517950 11023169 ~ 11237850 (-) False AMCG00015532
TU122907 other upstream 728096 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other upstream 752059 11257278 ~ 11261168 (-) False AMCG00015535

Expression Profile