RNA id: AMCG00015581


Basic Information

Item Value
RNA id AMCG00015581
length 306
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00015581
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13076299 ~ 13107013 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGAGAGCTGTGATTGGAAAGAGGCCACAGAATCCGACATACTGCCGTCAGCTTCAGAGATGTGGGTCCCACCAAGTTTCCGTCGAATTCCCAAAGGGGAGCTGGAAAGGGTGGCCAGCAGCGTGGAACTGAATGAGAAGATGCTGCAGTACTATGATCTGCCCACCATGGAAGTCATGACCAAAAAGATCCTCCAGAAGATCCCACGCATGGATTTGGTCCTGAGACTGGAGGAAAAGCTGAGGAATTTGATTCGACTTGACTTGACTCAAGCTGGGTATGTCAAAAGACTACTCCCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123159 lncRNA upstream 263607 12812476 ~ 12812692 (+) True G98731
TU123031 lncRNA upstream 671180 12399733 ~ 12405119 (+) True G98625
TU122993 lncRNA upstream 1528480 11547565 ~ 11547819 (+) True G98590
TU122970 lncRNA upstream 1607671 11466852 ~ 11468628 (+) True G98569
TU122927 lncRNA upstream 1659700 11362033 ~ 11416599 (+) False AMCG00015544
TU123289 lncRNA downstream 106857 13213870 ~ 13214646 (+) True G98831
TU123296 lncRNA downstream 150086 13257099 ~ 13259347 (+) True G98838
TU123308 lncRNA downstream 153982 13260995 ~ 13262832 (+) True G98843
TU123305 lncRNA downstream 153997 13261010 ~ 13262266 (+) False G98843
TU123353 lncRNA downstream 280063 13387076 ~ 13391419 (+) True G98876
AMCG00015576 mRNA upstream 64417 12992232 ~ 13011882 (+) True AMCG00015576
AMCG00015571 mRNA upstream 153314 12914666 ~ 12922985 (+) True AMCG00015571
AMCG00015572 mRNA upstream 168342 12902932 ~ 12907957 (+) True AMCG00015572
AMCG00015573 mRNA upstream 179888 12886859 ~ 12896411 (+) True AMCG00015573
AMCG00015566 mRNA upstream 201537 12860036 ~ 12874762 (+) True AMCG00015566
AMCG00015584 mRNA downstream 4314 13111327 ~ 13112802 (+) True AMCG00015584
AMCG00015580 mRNA downstream 47505 13154518 ~ 13155953 (+) True AMCG00015580
AMCG00015583 mRNA downstream 61644 13168657 ~ 13171973 (+) True AMCG00015583
AMCG00015587 mRNA downstream 133178 13240191 ~ 13242891 (+) True AMCG00015587
AMCG00015585 mRNA downstream 144000 13251013 ~ 13256153 (+) True AMCG00015585
TU123193 other upstream 29486 12975639 ~ 13046813 (+) True G98759
TU123045 other upstream 613634 12460584 ~ 12462665 (+) False AMCG00015555
TU122931 other upstream 1714556 11358152 ~ 11361743 (+) False AMCG00015544
TU122817 other upstream 2009444 11064718 ~ 11066855 (+) False AMCG00015539
TU122743 other upstream 2335166 10735979 ~ 10741133 (+) True G98402
TU123357 other downstream 316867 13423880 ~ 13429300 (+) True G98878
TU123358 other downstream 326038 13433051 ~ 13437147 (+) True AMCG00015591
TU123359 other downstream 326038 13433051 ~ 13435702 (+) False AMCG00015591
TU123364 other downstream 338512 13445525 ~ 13447279 (+) True G98884
TU123395 other downstream 469183 13576196 ~ 13593370 (+) True AMCG00015602

Expression Profile