RNA id: AMCG00015602


Basic Information

Item Value
RNA id AMCG00015602
length 189
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00015602
representative False

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13576196 ~ 13613292 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTGACCATGGTGACGGGCCTGCTGGAGTGCATGTGTTTCTCAGGAGTGGTGTTCGGCTGGGCATCCCTTGTCTTTGTCCTGAAGGCCGATGGgtggggAATCTCTTCTCCTCTCGTCGATCGACAATCATCACTCTCTACAATGGTGCTTTTGATTCATCCTCTGTAATCTTCCTCATTGTCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123377 lncRNA upstream 66687 13493782 ~ 13516429 (+) True G98889
TU123361 lncRNA upstream 123330 13458129 ~ 13459786 (+) True G98881
TU123368 lncRNA upstream 128990 13453887 ~ 13454126 (+) True G98888
TU123353 lncRNA upstream 191697 13387076 ~ 13391419 (+) True G98876
TU123308 lncRNA upstream 320284 13260995 ~ 13262832 (+) True G98843
TU123431 lncRNA downstream 198906 13791042 ~ 13810939 (+) True G98918
TU123465 lncRNA downstream 289289 13881425 ~ 13884671 (+) True AMCG00015608
TU123466 lncRNA downstream 289289 13881425 ~ 13884671 (+) False AMCG00015608
TU123637 lncRNA downstream 325459 13917595 ~ 13918028 (+) True G99053
TU123640 lncRNA downstream 333112 13925248 ~ 13933503 (+) True G99056
AMCG00015597 mRNA upstream 66532 13501643 ~ 13516584 (+) True AMCG00015597
AMCG00015591 mRNA upstream 146989 13433454 ~ 13436127 (+) False AMCG00015591
AMCG00015588 mRNA upstream 216986 13351516 ~ 13366130 (+) True AMCG00015588
AMCG00015590 mRNA upstream 245682 13329582 ~ 13337434 (+) True AMCG00015590
AMCG00015585 mRNA upstream 326963 13251013 ~ 13256153 (+) True AMCG00015585
AMCG00015600 mRNA downstream 6150 13598286 ~ 13607255 (+) True AMCG00015600
AMCG00015607 mRNA downstream 96954 13689090 ~ 13716822 (+) True AMCG00015607
AMCG00015609 mRNA downstream 210345 13802481 ~ 13821972 (+) True AMCG00015609
AMCG00015610 mRNA downstream 240459 13832595 ~ 13834746 (+) True AMCG00015610
AMCG00015608 mRNA downstream 290474 13882610 ~ 13884666 (+) False AMCG00015608
TU123364 other upstream 135837 13445525 ~ 13447279 (+) True G98884
TU123358 other upstream 145969 13433051 ~ 13437147 (+) True AMCG00015591
TU123359 other upstream 147414 13433051 ~ 13435702 (+) False AMCG00015591
TU123357 other upstream 153816 13423880 ~ 13429300 (+) True G98878
TU123193 other upstream 536303 12975639 ~ 13046813 (+) True G98759
TU123659 other downstream 504809 14096945 ~ 14100855 (+) True G99074
TU124082 other downstream 1456787 15048923 ~ 15179850 (+) False AMCG00015657
TU124222 other downstream 1721900 15314036 ~ 15314414 (+) True G99475
TU124310 other downstream 2204814 15796950 ~ 15801634 (+) True G99541
TU124453 other downstream 2538908 16131044 ~ 16131387 (+) True G99624