RNA id: AMCG00015605


Basic Information

Item Value
RNA id AMCG00015605
length 384
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00015605
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13740897 ~ 13742235 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCCCAGATCATAGTGTTCCCAGAGGATGGTATCCACAGTTTATAATTCACTTGGAACTCCATTGTGGGATATCTGGAGACCATTCCAGACCCCCAAGCATCCGCTGGAACCCCTGTGTGGAGCCGGAGAAATTCCCCAACACTGAGGTTCAGCACCGACTGAGCTGCATGTCCAAGAACCACTCCATCTTCTTGGTGGCCAACATCCCTGATCACCAGAACTGCACCAGCACCGACCCACACTGCCCTGCAGATAAGCACTACCAGTTCAACACTGATGTTGTCTTCAGTGCCATCGGGACACTAGTTGCCCGTTATcacaaacaacattttgatATCCCTCCTAGAACTGAGCACATCACCTTCGATCTGACCTGGGCAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123537 lncRNA downstream 6139 13728676 ~ 13734758 (-) False AMCG00015606
TU123546 lncRNA downstream 6139 13728676 ~ 13734758 (-) False AMCG00015606
TU123550 lncRNA downstream 6139 13728676 ~ 13734758 (-) False AMCG00015606
TU123574 lncRNA downstream 143174 13579725 ~ 13597723 (-) True G99002
TU123527 lncRNA downstream 199940 13538527 ~ 13540957 (-) True G98993
TU123572 lncRNA upstream 45672 13787907 ~ 13810895 (-) False AMCG00015606
TU123556 lncRNA upstream 48813 13791048 ~ 13845677 (-) False AMCG00015606
TU123614 lncRNA upstream 92282 13834517 ~ 13840231 (-) False AMCG00015612
TU123615 lncRNA upstream 92282 13834517 ~ 13840231 (-) False AMCG00015612
TU123616 lncRNA upstream 92282 13834517 ~ 13839676 (-) False AMCG00015612
AMCG00015606 mRNA downstream 2111 13722074 ~ 13738786 (-) False AMCG00015606
AMCG00015601 mRNA downstream 75120 13663657 ~ 13665777 (-) True AMCG00015601
AMCG00015603 mRNA downstream 116192 13606375 ~ 13624705 (-) True AMCG00015603
AMCG00015599 mRNA downstream 219883 13520664 ~ 13521014 (-) True AMCG00015599
AMCG00015598 mRNA downstream 272075 13458554 ~ 13468822 (-) True AMCG00015598
AMCG00015604 mRNA upstream 11833 13754068 ~ 13760730 (-) True AMCG00015604
AMCG00015613 mRNA upstream 84742 13826977 ~ 13829722 (-) True AMCG00015613
AMCG00015612 mRNA upstream 95716 13837951 ~ 13850783 (-) False AMCG00015612
AMCG00015611 mRNA upstream 123616 13865851 ~ 13869990 (-) True AMCG00015611
AMCG00015614 mRNA upstream 315104 14057339 ~ 14076142 (-) True AMCG00015614
TU123543 other downstream 1778 13671315 ~ 13739119 (-) True AMCG00015606
TU123499 other downstream 281108 13458127 ~ 13459789 (-) False AMCG00015598
TU122943 other downstream 2324235 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 2354698 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 2479729 11233315 ~ 11261168 (-) False AMCG00015535
TU123617 other upstream 98994 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 98994 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 98994 13841229 ~ 13864738 (-) False AMCG00015612
TU123831 other upstream 583932 14326167 ~ 14334932 (-) False AMCG00015628
TU123851 other upstream 705476 14447711 ~ 14456695 (-) True G99213